Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_E12
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 165 3e-40
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 165 3e-40
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 165 3e-40
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 165 3e-40
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 165 3e-40
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 165 3e-40
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 165 3e-40
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 163 8e-40
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 31 4.3
AY256461-1|AAP12522.1| 921|Homo sapiens zinc in-between-ring-fi... 30 9.9
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 165 bits (400), Expect = 3e-40
Identities = 82/117 (70%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 163 bits (396), Expect = 8e-40
Identities = 81/117 (69%), Positives = 86/117 (73%)
Frame = +3
Query: 108 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDXXXXXXXXXX 287
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPD
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 288 XXXXXXXXXALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMKXVRGT 458
+IYD+LD AKK EPKHRLARHGLYEKK+ +R+QRKERKN MK VRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGT 120
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 31.5 bits (68), Expect = 4.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 315 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNXMK 443
+++ + LDL K E RLA EKK+ +K++K++K K
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKK 1499
>AY256461-1|AAP12522.1| 921|Homo sapiens zinc
in-between-ring-finger ubiquitin-associated domain
protein.
Length = 921
Score = 30.3 bits (65), Expect = 9.9
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = -3
Query: 432 SYVLYAVCAWASSSRTGRGGLTCAWARTSWPDRVCRRSKRIQXTXHLRSXSXNRIRTL 259
SYVL V A G G +C AR +W DR + ++ R +++L
Sbjct: 378 SYVLEMVAELAGQQDPGLGAFSCQEARRAWLDRHGNLDEAVEECVRTRRRKVQELQSL 435
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,558,242
Number of Sequences: 237096
Number of extensions: 1384707
Number of successful extensions: 2708
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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