Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_E10
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 46 6e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 5e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.004
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.075
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 31 0.30
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.53
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 2.8
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 5.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.6
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 8.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 46.4 bits (105), Expect = 6e-06
Identities = 35/132 (26%), Positives = 37/132 (28%), Gaps = 4/132 (3%)
Frame = +1
Query: 535 PPHP-PXXXXXXXPPPXXXXXXXXPG--APXXPLXXGGXPXPPXXXXKPPXXXXGPPPPX 705
PP P P P P P AP P+ G P P PP PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 706 XPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXX 885
P G P P P P PP P PP PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 886 PT-XTPPXPPXT 918
P+ PP P T
Sbjct: 1222 PSAGLPPVPVPT 1233
Score = 39.1 bits (87), Expect = 9e-04
Identities = 32/125 (25%), Positives = 35/125 (28%), Gaps = 3/125 (2%)
Frame = +1
Query: 544 PPXXXXXXXPPPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXX 723
PP PP P P P P PP PP P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV-PKPSV 1099
Query: 724 XXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP---PXGXXPPSXXPTX 894
PKP P P P P +P+ P PP P PP P+
Sbjct: 1100 AAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV-PSGAPPVPKPSVAAPPVPAPSG 1157
Query: 895 TPPXP 909
PP P
Sbjct: 1158 APPVP 1162
Score = 39.1 bits (87), Expect = 9e-04
Identities = 38/137 (27%), Positives = 41/137 (29%), Gaps = 11/137 (8%)
Frame = +1
Query: 532 TPPHPPXXXXXXX-PPPXXXXXXXXP------GAPXXPLXXGGXPXPPXXXXKPPXXXXG 690
TPP P PPP P GAP P G P P PP
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 691 PPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP---PX 861
P P+P PKP P P P P +P P PP P
Sbjct: 1109 VAVPPVPAPSGAPPV--PKPSVAAPPVPVPSGAPPVPKPSVAAPPVP-APSGAPPVPKPS 1165
Query: 862 GXXPPSXXP-TXTPPXP 909
PP P + PP P
Sbjct: 1166 VAAPPVPAPSSGIPPVP 1182
Score = 38.7 bits (86), Expect = 0.001
Identities = 32/130 (24%), Positives = 34/130 (26%), Gaps = 5/130 (3%)
Frame = +1
Query: 535 PPHPPXXXXXXXPPPXXXXXXXXPG--APXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXX 708
P P P P P AP P P P PP P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Query: 709 PSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP---PXGXXPPS 879
P P PKP P P P P +P PP P PP
Sbjct: 1134 PVPSGAPPV--PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 880 XXPTXTPPXP 909
P+ PP P
Sbjct: 1192 PPPSEAPPVP 1201
Score = 37.1 bits (82), Expect = 0.004
Identities = 30/104 (28%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Frame = +1
Query: 610 APXXPLXXGGXPXPPXXXXKPPXXXX--GPPPPXXPSPXXXXXFXWPKPGXPXXSXPDP- 780
AP PL P P PP PP P S P P S P P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Query: 781 XXXPXXXPXXXPP-PXLPLXPXSRPPPXGXXPPSXXPTXTPPXP 909
P P PP P + P P PP P+ PP P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 35.5 bits (78), Expect = 0.011
Identities = 32/132 (24%), Positives = 34/132 (25%), Gaps = 6/132 (4%)
Frame = +1
Query: 535 PPHP-PXXXXXXXPPPXXXXXXXXP-GAPXXPLXXGGXPXPPXXXXKPPXXXXG-PPP-- 699
PP P P P P P P P G P P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 700 -PXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPP 876
P P+P P P P P P PP P P PP
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 877 SXXPTXTPPXPP 912
P+ P P
Sbjct: 1142 VPKPSVAAPPVP 1153
Score = 32.7 bits (71), Expect = 0.075
Identities = 23/91 (25%), Positives = 24/91 (26%)
Frame = +1
Query: 607 GAPXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXX 786
G P P G P P PP P P P P G P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 787 XPXXXPXXXPPPXLPLXPXSRPPPXGXXPPS 879
P P P + S P P PS
Sbjct: 1237 PPVPAP-SSEAPSVSTPRSSVPSPHSNASPS 1266
Score = 31.9 bits (69), Expect = 0.13
Identities = 37/136 (27%), Positives = 43/136 (31%), Gaps = 13/136 (9%)
Frame = +1
Query: 535 PPHP-PXXXXXXXPPPXXXXXXXXPG--APXXPLXXGGXPXPPXXXXKPPXXXX--GPPP 699
PP P P P P P AP P G P P PP G PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 700 --------PXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP 855
P P P P G P P P P PP +P+ P ++ P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS-TAPPVPTPSAGLPP-VPV-PTAKAP 1237
Query: 856 PXGXXPPSXXPTXTPP 903
P P S P+ + P
Sbjct: 1238 PV-PAPSSEAPSVSTP 1252
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Frame = +1
Query: 691 PPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP---PX 861
PPP + PK P P P PP +P PP P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPP-VPKLSSKAPPVPLPS 1028
Query: 862 GXXPPSXXPTXTPPXPPXT 918
PP P+ PP P T
Sbjct: 1029 ADAPPIPVPSTAPPVPIPT 1047
Score = 26.6 bits (56), Expect = 5.0
Identities = 26/104 (25%), Positives = 27/104 (25%), Gaps = 5/104 (4%)
Frame = +1
Query: 613 PXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPGXPXXSXPDP---- 780
P L P P PP PP P P G P P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPV-PIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 781 XXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXPT-XTPPXP 909
P PP P P P PP P+ PP P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.9 bits (89), Expect = 5e-04
Identities = 36/136 (26%), Positives = 36/136 (26%), Gaps = 10/136 (7%)
Frame = +1
Query: 535 PPHPPXXXXXXXPP---PXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXX------ 687
PP PP PP P P G P PP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 688 GPPPPXXPSPXXXXXFXWPKPGXPXXSXPD-PXXXPXXXPXXXPPPXLPLXPXSRPPPXG 864
G PP S P P P S P P P P P P S PP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 865 XXPPSXXPTXTPPXPP 912
P P P PP
Sbjct: 433 PSAPPSLPMGAPAAPP 448
Score = 34.7 bits (76), Expect = 0.019
Identities = 32/128 (25%), Positives = 35/128 (27%), Gaps = 2/128 (1%)
Frame = +1
Query: 535 PPHPPXXXXXXXPPPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPPP--PXX 708
PP PP P P P G PP + PPP P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 709 PSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXP 888
+P P G + P P P PP P P S P PP P
Sbjct: 399 SAPAL------PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP--LP 450
Query: 889 TXTPPXPP 912
P PP
Sbjct: 451 PSAPIAPP 458
Score = 33.1 bits (72), Expect = 0.057
Identities = 38/158 (24%), Positives = 45/158 (28%)
Frame = +1
Query: 439 KINVCQSFLSDKRYIVKLKINKIFCT*FXXXTPPHPPXXXXXXXPPPXXXXXXXXPGAPX 618
K+ + Q +++ VK +N+ T PP PP PP P P
Sbjct: 198 KMGISQDQIAENADFVKAYLNESAGTPTSTSAPPIPPSIPSSR--PPERVPSLSAPAPPP 255
Query: 619 XPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXX 798
P P PP PP P P KP P S
Sbjct: 256 IP------PPSNGTVSSPPN---SPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAA 306
Query: 799 XPXXXPPPXLPLXPXSRPPPXGXXPPSXXPTXTPPXPP 912
PPP P PP G S PP PP
Sbjct: 307 NKKRPPPPPPPSRRNRGKPPIGNGS-SNSSLPPPPPPP 343
Score = 33.1 bits (72), Expect = 0.057
Identities = 28/109 (25%), Positives = 31/109 (28%), Gaps = 2/109 (1%)
Frame = +1
Query: 535 PPHPPXXXXXXXPPPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPP--PPXX 708
PP P PP P P P P P PP G P PP
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-PSLPPSAPPSLPMGAPAAPPLP 450
Query: 709 PSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPP 855
PS P P + P P P P P P P+ + P
Sbjct: 451 PSAPIAP----PLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELP 495
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/94 (23%), Positives = 23/94 (24%)
Frame = +1
Query: 571 PPPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKP 750
PPP P P P PP PP PS P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 751 GXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRP 852
+ P P P P P P P P
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 3.8
Identities = 22/95 (23%), Positives = 23/95 (24%), Gaps = 1/95 (1%)
Frame = +1
Query: 574 PPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPG 753
PP AP P PP PP PS P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 754 XPXXSXPDPXXXPXXXPXXXP-PPXLPLXPXSRPP 855
S P P P P PP P P + P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/66 (24%), Positives = 18/66 (27%)
Frame = +3
Query: 714 PXXXTPXSLAXTGXXXXXSXGPPXPXXXXXXXTPXXXPPPLXXXPPPARXXXPPXXPPHX 893
P TP SL + PP P P+ P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 894 HPPXPP 911
PP P
Sbjct: 475 APPPAP 480
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.1 bits (82), Expect = 0.004
Identities = 30/95 (31%), Positives = 30/95 (31%)
Frame = -2
Query: 887 GXXXGGXXPXGGGRXXGKRGRXGGGXXXGXXXGXXXGSGXXXXGXPGXGQXXXXXXXGEG 708
G GG GGG G G G G G G G G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFG-----GEGHHHGGHGGFGGGPGGFEGGPG 238
Query: 707 XXGGGGPXXXXGGXXXXXGGXGXPPXXRGXXGAPG 603
GGG P GG GG G G G PG
Sbjct: 239 GFGGG-PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 31.9 bits (69), Expect = 0.13
Identities = 36/119 (30%), Positives = 38/119 (31%), Gaps = 3/119 (2%)
Frame = -2
Query: 917 VXGGXGGVXVGXXXGGXXPXGGGRXXGKRGRXGGGXXX--GXXXGXXXGSGXXXXGXPGX 744
V G GG+ +G G G RG GGG G G G G G G
Sbjct: 159 VAAGLGGLALG----GLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFG-GFGGF 213
Query: 743 GQXXXXXXXGEGXXGGGGPXXXXGGXXXXXGG-XGXPPXXRGXXGAPGXXXXXXXXGGG 570
G G G G GGP GG GG G G G PG GG
Sbjct: 214 G-GEGHHHGGHGGFG-GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/76 (30%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Frame = +1
Query: 691 PPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXX 870
P P P+P P P P P P P PP L P ++P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP-PIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 871 PPS--XXPTXTPPXPP 912
PPS P+ PP PP
Sbjct: 184 PPSAPSLPSAVPPMPP 199
Score = 35.9 bits (79), Expect = 0.008
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +1
Query: 691 PPPPXXPSPXXXXXFXWPKPGXPXXSX----PDPXXXPXXXPXXXPPPXLPLXPXSRPPP 858
P PP S P+P P S P P P P PPP P P + PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI-PSSLPPPAQPAAPV-KSPP 185
Query: 859 XGXXPPSXXPTXTPPXPP 912
PS P P PP
Sbjct: 186 SAPSLPSAVPPMPPKVPP 203
Score = 33.5 bits (73), Expect = 0.043
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +1
Query: 649 PPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXL 828
PP PP PP P P +P P S P P P PP +
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM--PPKV 201
Query: 829 PLXPXSRPP 855
P P S+ P
Sbjct: 202 PPPPLSQAP 210
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/62 (33%), Positives = 23/62 (37%)
Frame = +1
Query: 532 TPPHPPXXXXXXXPPPXXXXXXXXPGAPXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXP 711
+PP PP P P P P P+ G P PP P GPPPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPP----PGVAGAGPPPPPPP 781
Query: 712 SP 717
P
Sbjct: 782 PP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +1
Query: 742 PKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXPTXTPPXPP 912
P P P P P P P PP + P PPP G P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPGV--AGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +1
Query: 742 PKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXPTXTPPXPP 912
P P P S PPP + P P P PP+ PP PP
Sbjct: 710 PSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Frame = +3
Query: 777 PPXPXXXXXXXTPXXXPPPLXXXPPPARXXXPPXXPP---HXHPPXPP 911
PP P TP P P+ P PP PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 613 PXXPLXXGGXPXPPXXXXKPPXXXXGPPPPXXPSPXXXXXFXWPKPGXP 759
P P P P PP G PPP P P P P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +1
Query: 757 PXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXPTXTPP 903
P S P P P P P +P P S PPP P S P+ P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP--PLPASSAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 813 PXXXPPPLXXXPPPARXXXPPXXPPHXHPPXP 908
P PPP+ PPP+ P P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/58 (31%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +1
Query: 697 PPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXP--XXXPXXXPPPXLPLXPXSRPPPXG 864
PP P P P P S P P P P PPP LP P G
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 772 PDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXXPPSXXPTXTPPXP 909
P P PPP + + P PP PPS P PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP---PPLP 1736
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = +1
Query: 778 PXXXPXXXPXXXPPPXL-----PLXPXSRPPPXGXXP-PSXXPTXTPPXPP 912
P P P PP + P P S PPP P P+ P+ PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/75 (26%), Positives = 21/75 (28%), Gaps = 2/75 (2%)
Frame = +1
Query: 694 PPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRP--PPXGX 867
PPP P P P P P P P LP + P P
Sbjct: 155 PPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNHPYSSPTSY 214
Query: 868 XPPSXXPTXTPPXPP 912
PP T P PP
Sbjct: 215 PPPLCPATYCPSNPP 229
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 829 PLXPXSRPPPXGXXPPSXXPTXTPPXPP 912
P P PPP G PPS P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPP---PPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 813 PXXXPPPLXXXPPPARXXXPPXXPPHXHPPXPP 911
P PPP PPP PP PP PP PP
Sbjct: 5 PPGNPPP----PPPPPGFEPPSQPP---PPPPP 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 838 PXSRPPPXGXXPPSXXPTXTPPXPP 912
P PPP P P+ PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 748 PGXPXXSXPDPXXXPXXXPXXXPPP 822
PG P P P P P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +1
Query: 820 PXLPLXPXS-RPPPXGXXPPSXXPTXTPPXPPXTXXF 927
P LP P S P P G + PT T P PP F
Sbjct: 268 PDLPKRPASIAPQPTGASTIAPQPTGTSPSPPVEMNF 304
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = -2
Query: 911 GGXGGVXVGXXX--GGXXPXGGGRXXGKRGRXGGG-XXXGXXXGXXXGSGXXXXGXPG 747
GG GG G GG GGGR + G GG G G G G G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -3
Query: 910 GGXGGXXWG-GXXGGXXXRAGGGXXXRGGGK 821
GG GG G G GG GG RGG K
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 910 GGXGGXXWGGXXGGXXXRAGGGXXXRGGGK 821
GG GG GG GG +GG +GG K
Sbjct: 45 GGRGGR--GGARGGRGGSSGGRGGAKGGAK 72
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 670 PPXXXXGPPPPXXPSP 717
PP GPPPP P P
Sbjct: 420 PPSHTYGPPPPVQPKP 435
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 691 PPPPXXPSPXXXXXFXWPKPGXPXXSXPDPXXXPXXXPXXXPPPXLPLXPXSRPPPXGXX 870
PPPP P P S P P P PL P PPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSS-GRAVSPEIPPTYTPKQADPL-PAPPPPPPPTL 246
Query: 871 PPSXXPTXTPPXP 909
PP T P P
Sbjct: 247 PPQSTNTSQLPMP 259
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 849 PPARXXXPPXXPPHXHPPXP 908
PP + P PPH HPP P
Sbjct: 164 PPTQHHHPHTRPPH-HPPHP 182
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,759,478
Number of Sequences: 5004
Number of extensions: 49706
Number of successful extensions: 381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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