Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_E07
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3B9.13c |rpp102|rpp1-2|60S acidic ribosomal protein Rpp1-2|S... 64 3e-11
SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein Rpp1-1|Sc... 64 3e-11
SPCP1E11.09c |rpp103|rpp1-3|60S acidic ribosomal protein Rpp1-3|... 59 6e-10
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.057
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.13
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 2.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 4.9
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 8.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 25 8.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 8.6
>SPBC3B9.13c |rpp102|rpp1-2|60S acidic ribosomal protein
Rpp1-2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 110
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +1
Query: 94 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 249
+S +ELA YSALIL D+ + +T +K+ ++ KAA VDVEP W +FAKALEG
Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEG 52
>SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein
Rpp1-1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 109
Score = 63.7 bits (148), Expect = 3e-11
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = +1
Query: 94 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 249
+S +ELA YSALIL D+ + +T +K+ ++ KAA VDVEP W +FAKALEG
Sbjct: 1 MSASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEG 52
>SPCP1E11.09c |rpp103|rpp1-3|60S acidic ribosomal protein
Rpp1-3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 109
Score = 59.3 bits (137), Expect = 6e-10
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1
Query: 94 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 249
+S +ELA Y+ALIL D+ + +T +K+ ++ KA V+VEP W +FAKALEG
Sbjct: 1 MSASELATSYAALILADEGIEITSDKLLSLTKAGNVEVEPIWATIFAKALEG 52
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.043
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 590 PXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P PPPP P P PP P P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Frame = +1
Query: 607 PXPXXXPXXPPPPXXXXXPX---PXPXXXPXXXPPP 705
P P PPPP P P P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 574 PXXPXPXXPXXPXPXXXPXXPPPPXXXXXPXPXPXXXPXXXPPPXXP 714
P P P P PPP P P P P PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPSAP 1731
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 584 PXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXP 682
P P PP P P PPPP P P
Sbjct: 1715 PPPPSAPPM-PAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.057
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Frame = +2
Query: 560 PXXXXPXXPX--PXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P PP P P PP P P P P PP P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 31.9 bits (69), Expect = 0.099
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 575 PXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXP 715
P P P PP P P PP P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLP 460
Score = 29.5 bits (63), Expect = 0.53
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P P P PP P P PP P PP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG----MPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 624 PPPPPPPXXXXXXPXXXPXXXXPXXPXXXXXXXPXPP 734
PP P PP P P P P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +2
Query: 584 PXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXP 715
P PP P P P P P P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +1
Query: 574 PXXPXPXXPXXPXPXXXPXXPPPPXXXXXPXPXPXXXPXXXPPP 705
P P P P P PP P P P P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +2
Query: 590 PXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXP 724
P PP P PP P P PP P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 627 PPPPPPXXXXXXPXXXPXXXXPXXPXXXXXXXPXPP 734
PPPPPP P P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 575 PXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXP 724
P P P P P PP P P P P PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 5/52 (9%)
Frame = +2
Query: 590 PXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXP-----XPPXPXXPXP 730
P PP P P P P P PP P PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P PP P PP P P P P P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 0.92
Identities = 17/73 (23%), Positives = 17/73 (23%)
Frame = +3
Query: 516 PPXPXXXXXXXXXXXXXXXXXXPXPXXXXXPXPXXXPPPPPPPXXXXXXPXXXPXXXXPX 695
PP P P P P P PP P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 696 XPXXXXXXXPXPP 734
P P PP
Sbjct: 1181 VPKPAAGVPPVPP 1193
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P PP P P P P P P P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P P P P P P P P P P P P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/73 (23%), Positives = 17/73 (23%)
Frame = +3
Query: 516 PPXPXXXXXXXXXXXXXXXXXXPXPXXXXXPXPXXXPPPPPPPXXXXXXPXXXPXXXXPX 695
PP P P P P P PP P P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 696 XPXXXXXXXPXPP 734
P P PP
Sbjct: 1200 VPKPSVGVPPVPP 1212
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 6/69 (8%)
Frame = +2
Query: 542 PXXXXXPXXXXPXXPXPXXXPP------XXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPX 703
P P P P P PP P P PP P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 704 PPXPXXPXP 730
P P P
Sbjct: 1123 VPKPSVAAP 1131
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/58 (27%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPP-XPXXPXP 730
P P P P PP P P P P P P P P P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P P P P P P P P P P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP---PVPVPSGAPPVPKPSVAAP 1150
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 575 PXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXPPXPXXPXP 730
P P P P P P P P P P P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAP---PVPAPSGAPPVPKPSVAAP 1169
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.23
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +2
Query: 527 PXXXXPXXXXXPXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXPXXXPXPXPPXXPXP 706
P P P P P PP P PP P P P PP P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVP-PMPPKVPPP 204
Query: 707 PXPXXP 724
P P
Sbjct: 205 PLSQAP 210
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Frame = +2
Query: 560 PXXXXPXXPXPXXXPPXXPXXXPXXPPPPXXXXXP-XXXPXPXPPXXPXPPXPXXP 724
P P P PP P PPP P P P P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 614 PXXXPXXPPPPXXXXXPXXXPXPXPP 691
P P PPPP P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 582 PXPXXXXXPXPXXXPPPPPPP 644
P P P PPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 640 PPXXXXXPXPXPXXXPXXXPPPXXP 714
PP P P P P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 612 PXXXPPPPPPP 644
P PPPPPPP
Sbjct: 5 PPGNPPPPPPP 15
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = +2
Query: 575 PXXPXPXXXPPXX-PXXXPXXPPPP 646
P P P PP P P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 612 PXXXPPPPPPP 644
P PPPPPPP
Sbjct: 6 PGNPPPPPPPP 16
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 624 PPPPPPPXXXXXXPXXXPXXXXP 692
PPPPPPP P P P
Sbjct: 371 PPPPPPPELLNHSPKSRPLGDKP 393
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Frame = +2
Query: 602 PPXXPXXX--PXXPPPPXXXXXPXXXPXPXPPXXPXPP 709
PP P P P PP P P PP P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP 614
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Frame = +2
Query: 635 PPPPXXXXXPXXXPXPXPPXXP-XPPXPXXPXP 730
P PP P P PP P P P P P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQP 607
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 612 PXXXPPPPPPP 644
P PPPPPPP
Sbjct: 234 PLPAPPPPPPP 244
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 612 PXXXPPPPPPP 644
P PPPPPPP
Sbjct: 1091 PSAVPPPPPPP 1101
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 612 PXXXPPPPPPP 644
P PPPPPPP
Sbjct: 942 PAFPPPPPPPP 952
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,725,949
Number of Sequences: 5004
Number of extensions: 29852
Number of successful extensions: 362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -