Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_D24
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 31 1.2
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.6
11_08_0048 - 28022335-28022520,28022607-28022699,28022804-280228... 31 1.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 31 1.6
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 31 1.6
06_01_0486 - 3455030-3455770 30 2.1
03_05_0630 + 26260159-26260272,26260520-26260894 29 4.9
03_01_0515 - 3864796-3865425 29 4.9
01_01_0384 - 2970369-2970726,2970812-2970882,2971428-2971509,297... 29 4.9
09_06_0081 + 20745627-20748144,20748211-20748308 29 6.5
04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339 29 6.5
01_06_1246 - 35703119-35703811,35704033-35704074,35704355-357045... 29 6.5
11_06_0610 - 25449085-25453284 28 8.5
09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293 28 8.5
08_01_0059 - 394001-394708 28 8.5
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 28 8.5
06_02_0126 + 12130409-12130532,12131015-12131373 28 8.5
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 875 GAGG*XRXGXGXGGXXSGXEXGXXR-WXGXXRXRGRGYNGXGXXG 744
G GG G GG G E G R + G GRGY G G G
Sbjct: 39 GVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGG 83
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +1
Query: 685 YPXFXPXHYLPPLTXXFXYVPXXPXPLXPLPLXLXXPXHLXXPCSXPLXXPP 840
+P P + PPL + P P P P P P P P PP
Sbjct: 301 FPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPPYPSPP 352
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 688 PXFXPXHYLPPLTXXFXYVPXXPXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPXLXYP 867
P P +LPP+ P P P P P P P PP P P P
Sbjct: 272 PPAFPFPHLPPIFSP-PSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPP 330
Query: 868 P 870
P
Sbjct: 331 P 331
>11_08_0048 -
28022335-28022520,28022607-28022699,28022804-28022882,
28022951-28023061,28023133-28023390,28023468-28023970,
28024094-28024729,28024778-28025116
Length = 734
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 772 LPLXLXXPXHLXXPCSXPLXXPPXPXPXLXYPPAP 876
+P+ L P + P P+ PP P P + PP P
Sbjct: 264 IPVSLSRPPVVASPRDNPIASPPRPEPPVASPPRP 298
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 718 PLTXXFXYVPXXPXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXP 852
PLT P P P P + P H P PL PP P P
Sbjct: 45 PLTPNPNPSPTLPPPPMSTPPVVAPPMHSFAPSFRPLGAPPPPPP 89
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 875 GAGG*XRXGXGXGGXXSGXEXGXXRWXGXXRXRGRG 768
G GG R G G GG G G R G R RGRG
Sbjct: 675 GGGGRGRGGGGGGGRGGGGGGGGGR-GGRGRGRGRG 709
>06_01_0486 - 3455030-3455770
Length = 246
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 688 PXFXPXHYLPPLTXXFX--YVPXXPXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPXLX 861
P + P Y+PP T + Y+P P P P P ++ P PP P P +
Sbjct: 97 PPYVPP-YIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPT------PPSPPPYVP 149
Query: 862 YPPAP 876
PP+P
Sbjct: 150 -PPSP 153
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 685 YPXFXPXHYLPPLTXXFXYVPXXPX---PLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPX 855
+P + P PP T YVP P P P P P ++ P + P P P
Sbjct: 76 HPPYTPPTPRPPPTPP--YVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPP 133
Query: 856 LXYPP 870
PP
Sbjct: 134 PYVPP 138
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 875 GAGG*XRXGXGXGGXXSGXEXGXXRWXGXXRXRGRGYNGXGXXG 744
G GG G G GG G G G R G GY G G G
Sbjct: 92 GGGGYGGGGGGYGGGRGGGGYGGGGGGGYGRREG-GYGGGGGYG 134
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 754 PXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPXLXYPPAP 876
P PL P P P P + PL PP P P + P P
Sbjct: 48 PPPLAPPPSVTSSPP---PPAAGPLMPPPPPPPSVTSSPPP 85
>01_01_0384 -
2970369-2970726,2970812-2970882,2971428-2971509,
2971757-2971818,2972308-2972401,2972502-2972569,
2972681-2972747,2972830-2972960,2973093-2973200,
2973577-2973642,2973706-2973774,2973990-2974115,
2974167-2974284,2974741-2974847,2975889-2976009,
2976162-2976235,2976955-2977051,2977564-2977679,
2978218-2978313,2978426-2978635,2979101-2979253
Length = 797
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +3
Query: 213 CXYFATAVSYWLSTINDNWMFQKPIQETLKTDKDSRVSRCT 335
C A V W++ + D W Q E + + + RCT
Sbjct: 498 CNVEAGVVKTWINFLEDTWQLQSSYNEQKEKRTNDELERCT 538
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 778 LXLXXPXHLXXPC--SXPLXXPPXPXPXLXYPPAP 876
L L P HL PC + P+ PP + PPAP
Sbjct: 169 LALRAPPHLRAPCGLAPPVPTPPALATHVPMPPAP 203
>04_01_0291 + 3848091-3848975,3849062-3849351,3858003-3858339
Length = 503
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 244 QYETAVAK*XQRPRPXHSMNGRVLNSRKHEPGEMRLCPDASAP 116
++ T K RPRP + R L + K E G++ L P S+P
Sbjct: 371 KHTTPRKKLASRPRPKIRTSSRKLKNEKGEKGKIVLVPSHSSP 413
>01_06_1246 -
35703119-35703811,35704033-35704074,35704355-35704576,
35705077-35705466,35705560-35705637
Length = 474
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +3
Query: 261 DNWMFQKPIQETLKTDKDSRVSRCTVCMRXWASQTYSTATRTGDVSFVPNAQRRP--FRG 434
+ WM +P + + +DKD + T AS+TY + PN RP +
Sbjct: 270 ERWMTSRPWESRVISDKDPKDHYSTKNPSTSASRTYVPRAISIQRPATPNKSSRPPSRQS 329
Query: 435 PS-PTGRVP 458
PS P RVP
Sbjct: 330 PSTPPSRVP 338
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +1
Query: 712 LPPLTXXFXYVPXXPXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPXLXYPPAP 876
LPP P P P P+ L P P P+ PP P PPAP
Sbjct: 1136 LPPPVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKS-PPPPAP 1189
>09_04_0614 - 18962141-18962716,18962839-18963119,18964092-18964293
Length = 352
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 426 FRGPSPTGRVPRWHRXGYRVXSRKVPSFNK 515
++G +P G W YR+ S+ +P NK
Sbjct: 132 YKGRAPRGEKTNWVMHEYRLHSKSIPKSNK 161
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 754 PXPLXPLPLXLXXPXHLXXPCSXPLXXPPXPXPXLXYPPAP 876
P P P P P P S P+ PP P P PP P
Sbjct: 12 PPPATPPP----PPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 875 GAGG*XRXGXGXGGXXSGXEXGXXRWXG 792
GAG G G GG SG G RW G
Sbjct: 18 GAGAGTSGGGGGGGGGSGGGGGGGRWSG 45
>06_02_0126 + 12130409-12130532,12131015-12131373
Length = 160
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 875 GAGG*XRXGXGXGGXXSGXEXGXXRWXGXXRXRGRGYNGXGXXG 744
G GG G G GG G G GRGY G G G
Sbjct: 95 GYGGGYGGGYGGGGGGGGYGGYGGYGGGGYEGYGRGYGGGGGGG 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,339,605
Number of Sequences: 37544
Number of extensions: 388298
Number of successful extensions: 1367
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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