Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_D18
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 116 2e-26
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 3.4
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 29 4.5
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 29 4.5
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 29 4.5
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 6.0
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 6.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 6.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 6.0
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 6.0
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.9
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.9
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 7.9
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 116 bits (280), Expect = 2e-26
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 6/136 (4%)
Frame = +1
Query: 148 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 321
M IYKDI T DE+ SD++ MKLVD+++YE G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 322 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNM 495
D VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ V+ FK +
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKI 120
Query: 496 NKVMKDILG--RFKEL 537
+ +L RFK L
Sbjct: 121 QGWVVSLLAKDRFKNL 136
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 530 RNFXFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGLXEEK 661
+N FF GE +G VA++EYRD DGT++P +M K + EEK
Sbjct: 134 KNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +1
Query: 181 EMFSDTYKMKLVDEVIYEVTG-----RLVTRAQGDIQIEGFNPSAEEADEGTDSAVESGV 345
E+ S TY +K+ E +++ G RL+ +E S D+ +
Sbjct: 343 ELTSHTYSLKVGGERVWDYAGDNYVHRLIENGADGKLVEYQRESNASFDDKNQKGGDKLE 402
Query: 346 DIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVE 477
I L + L+ T D++ Y L+ M++ ++K+E+ A QVE
Sbjct: 403 GIKLEYTLLLTSQLEDQRKYFEGLRHDMEQTMSKMEKTAYAQVE 446
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 501 FVHVCFKYFNLVRRLLFQFCY*FFHI 424
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 576 MPSQSIDSPVKXLKFLKPAEDVFHYFVHVCF-KYFNLVRRLLFQFCY 439
M ++SID+ V + + P+ + F+H CF K +++ +LFQF +
Sbjct: 1 MQTRSIDNVVNWSRCVHPSCVAWVIFIHFCFAKNCSILYFVLFQFTF 47
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 120 NKNRKNGFSPQTN*TGKHXNLKGFHXXXXG 31
N N + GF P N G H N GFH G
Sbjct: 89 NNNPQGGFHPNPNQGGFHPNQGGFHPNNGG 118
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 120 NKNRKNGFSPQTN*TGKHXNLKGFHXXXXG 31
N N + GF P N G H N GFH G
Sbjct: 89 NNNPQGGFHPNPNQGGFHPNQGGFHPNNGG 118
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 120 NKNRKNGFSPQTN*TGKHXNLKGFHXXXXG 31
N N + GF P N G H N GFH G
Sbjct: 89 NNNPQGGFHPNPNQGGFHPNQGGFHPNNGG 118
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 394 KKSYTLYLKDYMKKLVAKLEEK 459
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 394 KKSYTLYLKDYMKKLVAKLEEK 459
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 376 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 540
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 376 TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 540
T+ FG D++ Y++ +KD KKL + E+ + TN K + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 394 KKSYTLYLKDYMKKLVAKLEEK 459
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 FNPSAEEADEGTDSAVESG-VDIVLNH 363
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 286 FNPSAEEADEGTDSAVESG-VDIVLNH 363
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 391 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 534
+KK+ L L +K + K+EEKA K+ ++K +KD L R K+
Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 453 FQFCY*FFHIVFEVQCVGFLVTEGVCF 373
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,489,936
Number of Sequences: 27780
Number of extensions: 317850
Number of successful extensions: 930
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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