Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_D15
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0007 + 14044844-14045767                                         29   3.6  
11_06_0478 + 24073295-24074172,24074790-24075090                       29   6.3  
02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616...    28   8.4  

>10_08_0007 + 14044844-14045767
          Length = 307

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = +2

Query: 494 QFIVSHEGGDKVLQFPFFILSTDYDEYAIAYTCKTLKKKTRTHYVFTWILTRTKNK 661
           Q IV++ GG+ +  F     +T          C+TL+K+ + + +F W    ++++
Sbjct: 233 QQIVNYPGGNILASFTTAATTTSVPVETALSACRTLQKEGKLYGIFIWAADHSRSQ 288


>11_06_0478 + 24073295-24074172,24074790-24075090
          Length = 392

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 336 WTANLRLCHPGTSRKTTLATP 398
           W   LR+C+P T R+ TL  P
Sbjct: 80  WGGELRVCNPATRRRATLPPP 100


>02_03_0202 +
           16359539-16359763,16360113-16360193,16361362-16361600,
           16361828-16362029,16362108-16362188,16362272-16362455,
           16362625-16362791,16363020-16363802
          Length = 653

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 18/64 (28%), Positives = 29/64 (45%)
 Frame = +3

Query: 210 LYGASGAEFTLPGECPNMKLQENLDYTKFSGCMVQRCKLCKRWTANLRLCHPGTSRKTTL 389
           ++  +GA+    G      L   L YT   GC +QR +      A+ R     T+  TTL
Sbjct: 484 VFVVTGAQLVTKGTWSRKVLHLRLHYTHVPGCAIQRTEWAAAPAASQRGSFL-TTISTTL 542

Query: 390 ATPY 401
           ++P+
Sbjct: 543 SSPF 546


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,111,187
Number of Sequences: 37544
Number of extensions: 496185
Number of successful extensions: 1184
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)