Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_D14
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein. 91 6e-18
BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open readi... 91 6e-18
AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell p... 91 6e-18
AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens ... 88 3e-17
BC121038-1|AAI21039.1| 501|Homo sapiens PRDM5 protein protein. 30 9.6
BC121037-1|AAI21038.1| 599|Homo sapiens PRDM5 protein protein. 30 9.6
AF272897-1|AAF78077.1| 630|Homo sapiens PR-domain zinc finger p... 30 9.6
>BC019104-1|AAH19104.1| 208|Homo sapiens C8orf55 protein protein.
Length = 208
Score = 90.6 bits (215), Expect = 6e-18
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Frame = +3
Query: 201 DVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQXVDIFLRHMNNARYVRELDFAR 377
DV Y +R+ + RL Q + + G +D+ L HMNNARY+RE DFAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 378 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVXTKLVYWEXXXLFIEQKFI 557
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRQLRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 558 TLNDXFVRAIVLSRQXLLNVDAAALFXG-XPGADQXPECPXXIXXWLPSIXVSXAQLR 728
+L D FV A++ RQ LL + + PE P + W+ S LR
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWISYNEASSQLLR 196
>BC001311-1|AAH01311.1| 208|Homo sapiens chromosome 8 open reading
frame 55 protein.
Length = 208
Score = 90.6 bits (215), Expect = 6e-18
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Frame = +3
Query: 201 DVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQXVDIFLRHMNNARYVRELDFAR 377
DV Y +R+ + RL Q + + G +D+ L HMNNARY+RE DFAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 378 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVXTKLVYWEXXXLFIEQKFI 557
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 558 TLNDXFVRAIVLSRQXLLNVDAAALFXG-XPGADQXPECPXXIXXWLPSIXVSXAQLR 728
+L D FV A++ RQ LL + + PE P + W+ S LR
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWISYNEASSQLLR 196
>AF242773-1|AAF65450.1| 208|Homo sapiens mesenchymal stem cell
protein DSCD75 protein.
Length = 208
Score = 90.6 bits (215), Expect = 6e-18
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Frame = +3
Query: 201 DVNYFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQXVDIFLRHMNNARYVRELDFAR 377
DV Y +R+ + RL Q + + G +D+ L HMNNARY+RE DFAR
Sbjct: 20 DVWYLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFAR 78
Query: 378 FHFYDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVXTKLVYWEXXXLFIEQKFI 557
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+ ++E +F+
Sbjct: 79 VAHLTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFV 138
Query: 558 TLNDXFVRAIVLSRQXLLNVDAAALFXG-XPGADQXPECPXXIXXWLPSIXVSXAQLR 728
+L D FV A++ RQ LL + + PE P + W+ S LR
Sbjct: 139 SLRDGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWISYNEASSQLLR 196
>AK075407-1|BAC11600.1| 208|Homo sapiens protein ( Homo sapiens
cDNA PSEC0098 fis, clone NT2RP2002695, highly similar to
Mesenchymal stem cell protein DSCD75. ).
Length = 208
Score = 88.2 bits (209), Expect = 3e-17
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Frame = +3
Query: 210 YFLRIAFTIGIGRLFQKKC-GINDSTTIYGFCTTQXVDIFLRHMNNARYVRELDFARFHF 386
Y +R+ + RL Q + + G +D+ L HMNNARY+RE DFAR
Sbjct: 23 YLVRLPCAVLRARLLQPRVRDLLAEQRFPGRVLPSDLDLLL-HMNNARYLREADFARVAH 81
Query: 387 YDRTGIYTNIKAVDGHALQGASSIRYRRTIPIFSPYKVXTKLVYWEXXXLFIEQKFITLN 566
R G+ ++ + H + AS R+RR++ + P++V T+L+ W+ ++E +F++L
Sbjct: 82 LTRCGVLGALRELRAHTVLAASCARHRRSLRLLEPFEVRTRLLGWDDRAFYLEARFVSLR 141
Query: 567 DXFVRAIVLSRQXLLNVDAAALFXG-XPGADQXPECPXXIXXWLPSIXVSXAQLR 728
D FV A++ RQ LL + + PE P + W+ S LR
Sbjct: 142 DGFVCALLRFRQHLLGTSPERVVQHLCQRRVEPPELPADLQHWISYNEASSQLLR 196
>BC121038-1|AAI21039.1| 501|Homo sapiens PRDM5 protein protein.
Length = 501
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 407 YKYKSCGRSRSTRSLXYPLSKNYTNFQPIQS*X*AGLLGGXXSFHR-AKVYNSE*XFRES 583
YK K CG+ + R++ K ++ +P Q L S R ++NSE F+
Sbjct: 345 YKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCH 404
Query: 584 HCVVTTK 604
HC T K
Sbjct: 405 HCDATFK 411
>BC121037-1|AAI21038.1| 599|Homo sapiens PRDM5 protein protein.
Length = 599
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 407 YKYKSCGRSRSTRSLXYPLSKNYTNFQPIQS*X*AGLLGGXXSFHR-AKVYNSE*XFRES 583
YK K CG+ + R++ K ++ +P Q L S R ++NSE F+
Sbjct: 345 YKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCH 404
Query: 584 HCVVTTK 604
HC T K
Sbjct: 405 HCDATFK 411
>AF272897-1|AAF78077.1| 630|Homo sapiens PR-domain zinc finger
protein 5 protein.
Length = 630
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 407 YKYKSCGRSRSTRSLXYPLSKNYTNFQPIQS*X*AGLLGGXXSFHR-AKVYNSE*XFRES 583
YK K CG+ + R++ K ++ +P Q L S R ++NSE F+
Sbjct: 376 YKCKLCGKGFAHRNVYKNHKKTHSEERPFQCEECKALFRTPFSLQRHLLIHNSERTFKCH 435
Query: 584 HCVVTTK 604
HC T K
Sbjct: 436 HCDATFK 442
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,408,878
Number of Sequences: 237096
Number of extensions: 2004427
Number of successful extensions: 2646
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2646
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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