Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_D14
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   6.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   6.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   6.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -2

Query: 169 HYYTIHYIPEIK--PLKQLKRWIEL*NV 92
           H  TIH IPE+K  P  Q KR  E  N+
Sbjct: 394 HVLTIHTIPEVKVTPRFQAKRLKEEANI 421


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 402 IYTNIKAVDGHALQGASSIRYRRTIPIFSPY 494
           IY    A     L    S+ Y   IP+FSP+
Sbjct: 136 IYVQPSATFSLDLNKVVSVFYTAVIPMFSPF 166


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 169  HYYTIHYIPE 140
            H YTIHY PE
Sbjct: 1397 HGYTIHYKPE 1406


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 389 RSDWYLYKYKSCGRSRSTRSLXYPLSKNYTNF 484
           R+ W++  ++   + R   +   P +KNYT F
Sbjct: 422 RNPWFVEFWEHHFQCRYPNASVTPYNKNYTKF 453


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 419 FYICIDTSPIVEMESRKI*FPHISGIIHVPQENVNVLSSAKA 294
           FY   D S  ++     +   H +G++H   +  N+L ++KA
Sbjct: 5   FYSEADASHCIQQILESVHHCHHNGVVHRDLKPENLLLASKA 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,539
Number of Sequences: 438
Number of extensions: 4797
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)