Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_D03
(1124 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.007
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.007
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.007
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 37 0.030
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 34 0.21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.28
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.28
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.37
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.49
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.49
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.49
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.65
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.65
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.65
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.65
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 32 0.85
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.85
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 32 0.85
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 2.0
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 2.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 2.0
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 2.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 2.0
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 2.0
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 2.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 2.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.4
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 7.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.9
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 29 7.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.007
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P +G G P P+ P PP G PPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 245 GXPXP----PPXGXTPPP 204
P P PP G PPP
Sbjct: 298 PPPPPPRGSPPTGSLPPP 315
Score = 34.7 bits (76), Expect = 0.12
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PP G G AG R P P + P PP G PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 245 ---GXPXPPPXGXTPPP 204
G PP G +PPP
Sbjct: 307 PPTGSLPPPQAGGSPPP 323
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTP-PPXPR 195
G P P A P PP PPP G P PP G P PP PR
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPR 304
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXK--AXGXXXVPXXTXXXPPXXXGXXPPPXXX 256
G PPP R S P G P A G P PP PP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 255 XXXXXPXXPPPXGXPXPXP 199
PPP G P P
Sbjct: 313 PPPQAGGSPPPAGTGSPPP 331
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP R S P G P PP G PPP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-SPPPPPRQK 336
Query: 249 XXXPXXPPPXGXP 211
P PP G P
Sbjct: 337 RQAPERSPPTGSP 349
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.007
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P +G G P P+ P PP G PPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 245 GXPXP----PPXGXTPPP 204
P P PP G PPP
Sbjct: 319 PPPPPPRGSPPTGSLPPP 336
Score = 34.7 bits (76), Expect = 0.12
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PP G G AG R P P + P PP G PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 245 ---GXPXPPPXGXTPPP 204
G PP G +PPP
Sbjct: 328 PPTGSLPPPQAGGSPPP 344
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTP-PPXPR 195
G P P A P PP PPP G P PP G P PP PR
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPR 325
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXK--AXGXXXVPXXTXXXPPXXXGXXPPPXXX 256
G PPP R S P G P A G P PP PP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 255 XXXXXPXXPPPXGXPXPXP 199
PPP G P P
Sbjct: 334 PPPQAGGSPPPAGTGSPPP 352
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP R S P G P PP G PPP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-SPPPPPRQK 357
Query: 249 XXXPXXPPPXGXP 211
P PP G P
Sbjct: 358 RQAPERSPPTGSP 370
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.007
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P +G G P P+ P PP G PPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 245 GXPXP----PPXGXTPPP 204
P P PP G PPP
Sbjct: 304 PPPPPPRGSPPTGSLPPP 321
Score = 34.7 bits (76), Expect = 0.12
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PP G G AG R P P + P PP G PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 245 ---GXPXPPPXGXTPPP 204
G PP G +PPP
Sbjct: 313 PPTGSLPPPQAGGSPPP 329
Score = 33.9 bits (74), Expect = 0.21
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTP-PPXPR 195
G P P A P PP PPP G P PP G P PP PR
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSPPPPPPPR 310
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXK--AXGXXXVPXXTXXXPPXXXGXXPPPXXX 256
G PPP R S P G P A G P PP PP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 255 XXXXXPXXPPPXGXPXPXP 199
PPP G P P
Sbjct: 319 PPPQAGGSPPPAGTGSPPP 337
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP R S P G P PP G PPP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG-SPPPPPRQK 342
Query: 249 XXXPXXPPPXGXP 211
P PP G P
Sbjct: 343 RQAPERSPPTGSP 355
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 36.7 bits (81), Expect = 0.030
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPP-XGXTPPPXP 198
PP G PPP G P PPP G PPP P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
PP G PPP G P PPP PPP P
Sbjct: 87 PPMFAGGIPPP-PPMMGGIPPPPPMFGAPPPPP 118
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPP--XGXTPPPXP 198
PP G PPP G P PPP G PPP P
Sbjct: 67 PPVPNGFIPPP--PGPGGIPPPPPMFAGGIPPPPP 99
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
PP G PPP P PPP G P P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQP 129
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 321 VPXXTXXXPPXXXGXXPPPXXXXXXXXPXXPPPXGXPXPXP 199
VP PP G PPP P P G P P P
Sbjct: 69 VPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 298 PPXXXWGGPPPPXXXXXXGXXXPPPXGXPXPP 203
PP GG PPP PP G P PP
Sbjct: 86 PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 33.9 bits (74), Expect = 0.21
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 419 PXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXX-PPXXXGXXPPPXXXXXXG 243
P PG G GL G P P E P P PP G PP G
Sbjct: 218 PGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPG 277
Query: 242 XPXPPPXGXTPPPXPRV 192
P P G PP P +
Sbjct: 278 SSQPGPQG--PPGDPGI 292
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXPRVXF 186
P P P PP G PPP P PP PPP P F
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 325
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPP---PXGXTPPPXPR 195
P P P P PP PP P P P G PPP PR
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPX-GXTPPP 204
P P P P P PPP P PPP G TP P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.28
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXPRVXF 186
P P P PP G PPP P PP PPP P F
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRF 335
Score = 29.5 bits (63), Expect = 4.5
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPP---PXGXTPPPXPR 195
P P P P PP PP P P P G PPP PR
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPX-GXTPPP 204
P P P P P PPP P PPP G TP P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.1 bits (72), Expect = 0.37
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -1
Query: 347 PXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
P P P P PP PP P PPP PPP P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.49
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP G P G+P G P PP G PPP
Sbjct: 711 GGPPPPPGLPPITGG--PPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 767
Query: 249 XXXPXXPPP----XGXPXPXP 199
P PPP G P P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPP----XXXXXXGXPXPPPXGXTPP 207
P P PP G PPP G P PPP G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.7 bits (71), Expect = 0.49
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P G G P P P PP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKG 782
Query: 245 GXPXPPPXGXTPPPXP 198
G P PPP G P P
Sbjct: 783 GPPPPPPPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
G P P P PP G PP P PPP G PPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 296 PPXXXGXXPPP-XXXXXXGXPXPPPXGXTPP 207
PP G PPP G P PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.49
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP G P G+P G P PP G PPP
Sbjct: 711 GGPPPPPGLPPITGG--PPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 767
Query: 249 XXXPXXPPP----XGXPXPXP 199
P PPP G P P P
Sbjct: 768 CPPPPPPPPPGGFKGGPPPPP 788
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPP----XXXXXXGXPXPPPXGXTPP 207
P P PP G PPP G P PPP G PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 32.7 bits (71), Expect = 0.49
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P G G P P P PP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKG 782
Query: 245 GXPXPPPXGXTPPPXP 198
G P PPP G P P
Sbjct: 783 GPPPPPPPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
G P P P PP G PP P PPP G PPP P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPP 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 296 PPXXXGXXPPP-XXXXXXGXPXPPPXGXTPP 207
PP G PPP G P PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.49
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = -3
Query: 429 GXPPPGXGXKKXXXXRRXSXXXXPXGVPXKAXGXXXVPXXTXXXPPXXXGXXPPPXXXXX 250
G PPP G P G+P G P PP G PPP
Sbjct: 294 GGPPPPPGLPPITGG--PPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 350
Query: 249 XXXPXXPPP----XGXPXPXP 199
P PPP G P P P
Sbjct: 351 CPPPPPPPPPGGFKGGPPPPP 371
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPP----XXXXXXGXPXPPPXGXTPP 207
P P PP G PPP G P PPP G PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 32.7 bits (71), Expect = 0.49
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
PPP P G G P P P PP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP---PPPPGGFKG 365
Query: 245 GXPXPPPXGXTPPPXP 198
G P PPP G P P
Sbjct: 366 GPPPPPPPGMFAPMAP 381
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 353 GFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
G P P P PP G PP P PPP G PPP P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPP 357
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -1
Query: 296 PPXXXGXXPPP-XXXXXXGXPXPPPXGXTPP 207
PP G PPP G P PPP G PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.65
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
P P GPG G G G P P P P PP PP
Sbjct: 104 PGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPA 161
Query: 245 GXPXPPPXGXTP 210
G P PP P
Sbjct: 162 GPPGPPGPDGNP 173
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.65
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
P P GPG G G G P P P P PP PP
Sbjct: 104 PGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPA 161
Query: 245 GXPXPPPXGXTP 210
G P PP P
Sbjct: 162 GPPGPPGPDGNP 173
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.65
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
P P GPG G G G P P P P PP PP
Sbjct: 104 PGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPA 161
Query: 245 GXPXPPPXGXTP 210
G P PP P
Sbjct: 162 GPPGPPGPDGNP 173
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.65
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXX 246
P P GPG G G G P P P P PP PP
Sbjct: 104 PGPPGPGGSPGKP--GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPA 161
Query: 245 GXPXPPPXGXTP 210
G P PP P
Sbjct: 162 GPPGPPGPDGNP 173
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.9 bits (69), Expect = 0.85
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G + G P KP A P P P G PP
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQG---PPGPPGP 162
Query: 248 XGXPXPPPXGXTP 210
G P P TP
Sbjct: 163 PGAPGDPGEAGTP 175
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.85
Identities = 27/98 (27%), Positives = 27/98 (27%)
Frame = -2
Query: 496 GXGXXGPXXGGAGGXGMXXXGVRXPPPXXRXXEXKXXPPXXXXXXAGXGSXXSXRXPXSX 317
G G GG GM P R PP G P
Sbjct: 1523 GSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPH----GGMNGWRGGPPPPRG 1578
Query: 316 XKXXXXPPXXXWGGPPPPXXXXXXGXXXPPPXGXPXPP 203
PP GGPPP G PPP G P PP
Sbjct: 1579 GSHCQGPPPLM-GGPPPRLGMPPPGP--PPPNGGPPPP 1613
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.9 bits (69), Expect = 0.85
Identities = 23/73 (31%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G + G P KP A P P P G PP
Sbjct: 106 PGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQG---PPGPPGP 162
Query: 248 XGXPXPPPXGXTP 210
G P P TP
Sbjct: 163 PGAPGDPGEAGTP 175
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G G P KP A P P P G PP
Sbjct: 104 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQG---PPGPPGP 160
Query: 248 XGXPXPPPXGXTP 210
G P P TP
Sbjct: 161 PGAPGDPGEAGTP 173
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 419 PXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXP-XXXPPXXXGXXPPPXXXXXXG 243
P PG R AG G G P P A P P P G PP G
Sbjct: 182 PGSPGPRGPPGPAGEAGAPGPAGEPGTP--AISEPLTPGAPGEPGDSGPPGPPGPPGAPG 239
Query: 242 XPXPP-PXGXTPPPXP 198
PP P G P P
Sbjct: 240 NDGPPGPPGPKGAPGP 255
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXA-GXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GPG R G G G K A P P P G PP
Sbjct: 119 PGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGT 178
Query: 248 XGXPXPPPXGXTP 210
G P P +P
Sbjct: 179 PGEPGGPGPAGSP 191
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G G P KP A P P P G PP
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQG---PPGPPGP 155
Query: 248 XGXPXPPPXGXTP 210
G P P TP
Sbjct: 156 PGAPGDPGEAGTP 168
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 419 PXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXP-XXXPPXXXGXXPPPXXXXXXG 243
P PG R AG G G P P A P P P G PP G
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTP--AISEPLTPGAPGEPGDSGPPGPPGPPGAPG 234
Query: 242 XPXPP-PXGXTPPPXP 198
PP P G P P
Sbjct: 235 NDGPPGPPGPKGAPGP 250
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
PP P P G P PPP G PPP P
Sbjct: 772 PPPPPSAIPLPPRLQG-GIPPPPPLGIIPPPPP 803
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G G P KP A P P P G PP
Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQG---PPGPPGP 155
Query: 248 XGXPXPPPXGXTP 210
G P P TP
Sbjct: 156 PGAPGDPGEAGTP 168
Score = 29.9 bits (64), Expect = 3.4
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -1
Query: 419 PXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXP-XXXPPXXXGXXPPPXXXXXXG 243
P PG R AG G G P P A P P P G PP G
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTP--AISEPLTPGAPGEPGDSGPPGPPGPPGAPG 234
Query: 242 XPXPP-PXGXTPPPXP 198
PP P G P P
Sbjct: 235 NDGPPGPPGPKGAPGP 250
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 186 KXNTXXGGXGXPXGGGXWXPXXXXXXGGGGP 278
K N GG G P GGG P GGGGP
Sbjct: 610 KNNQAGGGPGGPGGGGG-PPRGPGGGGGGGP 639
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 186 KXNTXXGGXGXPXGGGXWXPXXXXXXGGGGP 278
K N GG G P GGG P GGGGP
Sbjct: 610 KNNQAGGGPGGPGGGGG-PPRGPGGGGGGGP 639
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 2.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 296 PPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
PP P P G P PPP G PPP P
Sbjct: 772 PPPPPSAIPLPPRLQG-GIPPPPPLGIIPPPPP 803
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/79 (25%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = -2
Query: 430 RXPPPXXRXXEXKXXPPXXXXXXAGXGSXXSXRXPXSXXKXXXXPPXXXWGGPPPPXXXX 251
R PPP + PP + R P K PP G P
Sbjct: 62 RRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEG 121
Query: 250 XXGXXXPPP---XGXPXPP 203
PPP G P PP
Sbjct: 122 NASRRPPPPPKGTGSPPPP 140
Score = 28.7 bits (61), Expect = 7.9
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = -2
Query: 430 RXPPPXXRXXEXKXXPPXXXXXXAGXGSXXSXRXPXSXXKXXXXPPXXXWGGPPPPXXXX 251
R PPP + PP G + R P K PP G P
Sbjct: 94 RRPPPPPKGTGTPPPPPTGEPQDLS-GEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEG 152
Query: 250 XXGXXXPPP---XGXPXPP 203
PPP G P PP
Sbjct: 153 NASRRPPPPPKGTGSPPPP 171
Score = 28.7 bits (61), Expect = 7.9
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = -2
Query: 430 RXPPPXXRXXEXKXXPPXXXXXXAGXGSXXSXRXPXSXXKXXXXPPXXXWGGPPPPXXXX 251
R PPP + PP G + R P K PP G P
Sbjct: 218 RRPPPPPKGTGSPTPPPTGEPQDLS-GEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEG 276
Query: 250 XXGXXXPPP---XGXPXPP 203
PPP G P PP
Sbjct: 277 NASRRPPPPPKGTGTPPPP 295
Score = 25.4 bits (53), Expect(2) = 2.5
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXX----PPPXX 258
PPP G + G RR P PK P P P PP
Sbjct: 168 PPPPPTGEPQDLSTEGNAS--RRP--PPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPP 223
Query: 257 XXXXGXPXPPPXG 219
G P PPP G
Sbjct: 224 PKGTGSPTPPPTG 236
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -1
Query: 239 PXPPPXGXTPPPXP 198
P PPP G PP P
Sbjct: 251 PPPPPKGTGSPPPP 264
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/80 (25%), Positives = 21/80 (26%)
Frame = -1
Query: 431 EXPPPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXX 252
E PP P RK P P P P PP P
Sbjct: 119 EASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
Query: 251 XXGXPXPPPXGXTPPPXPRV 192
P P PPP PR+
Sbjct: 179 EPRNPPRTPPSPIPPPPPRL 198
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.6
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -1
Query: 425 PPPXGPGXRKXXXXAGXVGLXRRXGFPXKP-KXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
PPP PG G G + G P P P P P G PP
Sbjct: 211 PPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPG--PAGPPGPPGPPGQDGS 268
Query: 248 XGXPXPPPXGXTPPP 204
G P P G PP
Sbjct: 269 GGAAQPGPPGPPGPP 283
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
P+ P PP G P P PP PPP P
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
P+ P PP G P P PP PPP P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 3.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
P+ P PP G P P PP PPP P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.5 bits (63), Expect = 4.5
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = -1
Query: 425 PPPXGP-GXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXX 249
P P GP G G G + G P +P P P P G PP
Sbjct: 92 PGPQGPQGTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGI 151
Query: 248 XGXPXPPPXGXTPPPXP 198
G PP G P P
Sbjct: 152 PGDNGPP--GEQGPKGP 166
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PPXXXWGGPPPPXXXXXXGXXXPPPXGXPXPP 203
PP G PPPP G PPP G P P
Sbjct: 673 PPGGGQGPPPPPQGQQYYG--GPPPPGQPYGP 702
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 298 PPXXXWGGPPPPXXXXXXGXXXPPPXGXPXPP 203
PP G PPPP G PPP G P P
Sbjct: 673 PPGGGQGPPPPPQGQQYYG--GPPPPGQPYGP 702
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 422 PPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXG 243
PP PG AG G G P P PE P G PP
Sbjct: 185 PPGPPGPSGPAGPAGNDGAAGTPG-PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASP 243
Query: 242 XPXPPPXGXTPPPXP 198
P G PP P
Sbjct: 244 TAAPGAAGPPGPPGP 258
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 7.9
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 422 PPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXG 243
PP PG AG G G P P PE P G PP
Sbjct: 186 PPGPPGPPGPAGPAGNDGAAGTPG-PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASP 244
Query: 242 XPXPPPXGXTPPPXP 198
P G PP P
Sbjct: 245 TAAPGAAGPPGPPGP 259
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = -2
Query: 298 PPXXXWGGPPPPXXXXXXGXXXPPPXGXP---XPPXXVF 191
P +GGPPPP PP G P PP F
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF 397
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 317 PEXPXXXPPXXXGXXPPPXXXXXXGXPXPPPXGXTPPPXP 198
P P P G PPP P PP G PPP P
Sbjct: 562 PPPPPPLPQNLSGAPPPPP-------PPPPMLGGPPPPPP 594
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = -1
Query: 422 PPXGPGXRKXXXXAGXVGLXRRXGFPXKPKXAXEXPEXPXXXPPXXXGXXPPPXXXXXXG 243
PP PG G G G P +P A P P PP G P G
Sbjct: 176 PPGPPGPPGRPGPNGKAGANGLNGNPGRPPEAPCEPVTPPPCPPCPAGPKGAPGQAGYPG 235
Query: 242 XPXPP 228
P
Sbjct: 236 ADGQP 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,109,720
Number of Sequences: 27780
Number of extensions: 190200
Number of successful extensions: 2170
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3036427278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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