Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_D01
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    36   3e-04
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.59 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 36.3 bits (80), Expect = 3e-04
 Identities = 20/76 (26%), Positives = 34/76 (44%)
 Frame = +1

Query: 364 FSVFYDXXXXXAIALFXLFYYAKXFXTFYXSACFARVXLXXGQFLYAFYIAVIXRPDCHG 543
           FS+F       A  L  +F  A+       +A F R  +    F YAF +A++ RPD   
Sbjct: 80  FSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQN 139

Query: 544 FVVPAPYDXYPXMFMN 591
             +P+    +P  +++
Sbjct: 140 LDLPSFIHVFPDKYVD 155


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 226  LNTDDEYYKIGXDYDIEMNMXXYTNKKAVEEFLKMYXXGFMPKNLXFS 369
            L+ D EY K    + ++ N    ++K+A   F++     F PKNL  S
Sbjct: 2438 LDLDWEYPKC---WQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLS 2482



 Score = 23.0 bits (47), Expect = 3.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 226  LNTDDEYYKIGXDYDIEMNMXXYTNKKAVEEFLKMYXXGFMPKNLXFS 369
            L+ D EY K    + ++ N    ++K A  +F+K     F PK    S
Sbjct: 1940 LDLDWEYPKC---WQVDCNKGPASDKSAFADFVKELHEAFKPKGWLLS 1984


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 421  YYAKXFXTFYXSACFARVXLXXGQFLYAFYIAVI 522
            YYA  F     ++ F  +    GQFL  ++I +I
Sbjct: 1218 YYATIFTIITATSSFVTIHNVIGQFL-GYFIGLI 1250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,784
Number of Sequences: 336
Number of extensions: 1365
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)