Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C24
         (1322 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   7.8  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 960  REPPXRPXXNXPXRXPTXAPP 1022
            REP   P  N P   P   PP
Sbjct: 118  REPEAEPGNNRPVYIPQPRPP 138



 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +3

Query: 960  REPPXRPXXNXPXRXPTXAPP 1022
            REP   P  N P   P   PP
Sbjct: 144  REPEAEPGNNRPVYIPQPRPP 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.132    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,669
Number of Sequences: 438
Number of extensions: 2620
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 45623940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)