Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C22
         (898 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.26 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 298 EVKEGNELTPTQVKDEPSXEMGRGARTVLHSGHDR 402
           E   G   T TQ + EP   +GRG + VLH   D+
Sbjct: 156 ESSAGGSFTVTQDRGEP---LGRGTKIVLHMKEDQ 187


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 443 WHHWLVGHIXGXEVHSGXTLSQY 511
           +HH L+GH    +V++      Y
Sbjct: 135 YHHQLLGHFGATKVYNSMKREYY 157


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 540 ACTDTCSSCTNXHRXSXSXSRD 605
           ACTD  SSC +    S S   D
Sbjct: 32  ACTDDLSSCWSEDMGSFSLPLD 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,479
Number of Sequences: 336
Number of extensions: 2475
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)