Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C18
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.94
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 0.94
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.94
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 0.94
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 25 0.94
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 1.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 1.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 1.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 1.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 1.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 3.8
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 8.7
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 8.7
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.0 bits (52), Expect = 0.94
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.0 bits (52), Expect = 0.94
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 194 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.0 bits (52), Expect = 0.94
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 210 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 250
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.0 bits (52), Expect = 0.94
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 25.0 bits (52), Expect = 0.94
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 175 HELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
+E +K+ N +RN +H SSR + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREY 245
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 178 ELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 178 ELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 178 ELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 178 ELRKHGFEXNLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 297
E +K+ N +RN +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 791 PPNFCRSDCAPDLNTQSACLVRVF*HSR 708
PP F S C P+++ C+ + H++
Sbjct: 472 PPAFSHSRCPPEIHKSCICVRFIAEHTK 499
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 791 PPNFCRSDCAPDLNTQSACLVRVF*HSR 708
PP F S C P+++ C+ + H++
Sbjct: 472 PPAFSHSRCPPEIHKSCICVRFIAEHTK 499
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 179 SCTRPQXVNVLASEPTQRTTKAKXINXLHCER 84
S +R ++L S+P Q K K N HC +
Sbjct: 39 SSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQ 70
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 185 LSSCTRPQXVNVLAS 141
LSSCTRP N + S
Sbjct: 13 LSSCTRPSRGNAVPS 27
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 8.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 185 LSSCTRPQXVNVLAS 141
LSSCTRP N + S
Sbjct: 13 LSSCTRPSRGNAVPS 27
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,034
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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