Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C17
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.24
03_01_0515 - 3864796-3865425 33 0.43
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 31 0.99
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 31 1.7
05_03_0039 - 7621613-7622695 31 1.7
01_02_0007 + 10132380-10133201 31 1.7
04_03_1022 - 21778315-21779007 30 3.0
12_02_1174 - 26696869-26698191 29 4.0
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 4.0
06_03_0905 + 25843547-25844314 29 4.0
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 4.0
04_03_0904 + 20717005-20718087 29 4.0
11_06_0610 - 25449085-25453284 29 5.3
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 29 5.3
08_02_0610 + 19307537-19308011,19308187-19310846 29 7.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 7.0
07_03_1160 - 24430240-24431268 29 7.0
07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277 29 7.0
03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722... 29 7.0
01_01_0987 + 7803281-7803910,7803989-7804510 29 7.0
11_01_0066 - 536281-537196,537397-537452 28 9.2
09_04_0180 + 15367737-15367755,15368874-15369739 28 9.2
09_01_0083 + 1187861-1188340 28 9.2
08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860 28 9.2
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 28 9.2
05_03_0040 - 7646525-7647775 28 9.2
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 28 9.2
03_06_0189 + 32214702-32215154 28 9.2
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.2
01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191 28 9.2
01_01_0070 - 542603-542686,542803-543441 28 9.2
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +1
Query: 715 PXPNCTXKXKPLXXTR--VLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNY 888
P PNC P +LP + P P PP + VL PP P P + P
Sbjct: 593 PLPNCLVPSPPPPPPPPPILPNRSVPPPP--PPPPPLPNHSVLPPPPPPPPPPSLPNRLV 650
Query: 889 PPXP 900
PP P
Sbjct: 651 PPPP 654
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = +1
Query: 745 PLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPPXPGXQVXPXV 924
P T P P P +PP ++ PP P P + + P P PP P P
Sbjct: 40 PSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPP--PPLPPPPPPPAA 97
Query: 925 S 927
S
Sbjct: 98 S 98
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 31.5 bits (68), Expect = 0.99
Identities = 22/75 (29%), Positives = 26/75 (34%)
Frame = +1
Query: 694 PXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TX 873
P ++ P T PL T P TPP + L PP P P +
Sbjct: 32 PPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAIVPPALPPPPPLPAI-VV 90
Query: 874 PXPNYPPXPGXQVXP 918
P P PP P V P
Sbjct: 91 P-PALPPTPAIAVPP 104
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = +3
Query: 798 KTHAAQGXXVXSPPSSXPFXXPVNXPXPELPPXARXTGPTPXFP 929
+THAA SPPS P P P PP R PTP P
Sbjct: 700 RTHAA---VELSPPSPPHLRIPRPWPPPPPPPPRRRAEPTPERP 740
>05_03_0039 - 7621613-7622695
Length = 360
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Frame = +1
Query: 661 PXPLXEIXXYAPXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTP-PKVVXXEVL 837
P P E + +P PN K +P + P +P P K P PK
Sbjct: 84 PKPYPEPKPETKPELKPEPKPNPEPKPEPKPEPKPEPKP-YPEPKPKPKPEPKPEPKPEH 142
Query: 838 XP-PXPSPXL*TXPXPNYPPXPGXQVXP 918
P P P P P P P PG + P
Sbjct: 143 KPEPKPEPEPKPYPKPKPEPKPGPKPEP 170
>01_02_0007 + 10132380-10133201
Length = 273
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/86 (29%), Positives = 28/86 (32%)
Frame = +1
Query: 661 PXPLXEIXXYAPXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLX 840
P PL + AP P PN P P P P P + +
Sbjct: 149 PQPLPQPDPNAPSLPLPQPDPNAPPLPLPQPDPNA-PPQPLPQPDPN-NPQPLPQPDPNA 206
Query: 841 PPXPSPXL*TXPXPNYPPXPGXQVXP 918
PP P P P PN PP P Q P
Sbjct: 207 PPQPLPQ----PDPNSPPQPLPQPDP 228
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +1
Query: 715 PXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPP 894
P P +P + LP P P + P + L P P+P P PN PP
Sbjct: 80 PQPQPQPLPQPQPQPQPLPLPG-PQPLPQPGPQPNPNPQPLPQPNPNPQPLPQPDPNAPP 138
Query: 895 XPGXQVXP 918
P Q P
Sbjct: 139 LPLPQPNP 146
>04_03_1022 - 21778315-21779007
Length = 230
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +1
Query: 715 PXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPP 894
P P T P +LP P P PP L PP P+P PNY P
Sbjct: 18 PPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPH------LLPPSPAPQQWYDHPPNYHP 71
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +1
Query: 694 PXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TX 873
P V P P P+ RVL P P PP P P
Sbjct: 237 PAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKP 296
Query: 874 PXPNYPPXP 900
P P+ PP P
Sbjct: 297 PPPSPPPPP 305
Score = 28.7 bits (61), Expect = 7.0
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +1
Query: 721 PNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPPXP 900
P+ KP + P P P PP V V P P P L P PP
Sbjct: 138 PHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTR 197
Query: 901 GXQVXPXV 924
V P V
Sbjct: 198 PPSVKPPV 205
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 4.0
Identities = 29/82 (35%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 658 TPXPLXEIXXY-APXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEV 834
TP P EI Y +P V P P T P T P T P P +PP+VV
Sbjct: 564 TPSP-PEITPYPSPPEVTPGP-PEITPYPSPPEITPSPPEIT-PYP----SPPEVVPSPP 616
Query: 835 LXPPXPSPXL*TXPXPNYPPXP 900
P PSP T P P P
Sbjct: 617 KITPYPSPPEVTPSPPEITPYP 638
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 769 PXXTFPXPXGKXTPPKVVXXEVLXPPXP--SPXL*TXPXPNYPPXPGXQVXPXVS 927
P T+P P TPP VV V P P +P + P YP P P V+
Sbjct: 99 PPVTYPTPP-VTTPPVVVGPPVTYPTPPVTTPPVVVGPPVTYPTPPVTYPTPPVT 152
>05_05_0348 + 24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 238 MWRQSDLGGDVELTKAFVALDELIQAVPRSRRPPLNSW 351
M++ LGGD EL + +LD + V S RPP SW
Sbjct: 1183 MYQMITLGGDAEL-ELVDSLDPFSEGVVFSVRPPKKSW 1219
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/80 (27%), Positives = 25/80 (31%)
Frame = +1
Query: 661 PXPLXEIXXYAPXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLX 840
P P Y P P P T K +P P P P PK
Sbjct: 281 PKPTPTPTPYTPTP---KPNPPPTYKPQPKPTPTPTPYKPQPKPTPSPYTPKPTPTPPTY 337
Query: 841 PPXPSPXL*TXPXPNYPPXP 900
P P+P P P+Y P P
Sbjct: 338 TPTPTPPY-HKPPPSYTPGP 356
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Frame = +1
Query: 694 PXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXE---VLXPPXPSPXL 864
P A + P P K P +LP P P PP V V PP P+P +
Sbjct: 1170 PPAPVISPPP--PVKSPPPPAPVILP----PPPVKSPPPPAPVISPPPPVKSPPPPAPVI 1223
Query: 865 *TXPXPNYPPXPGXQVXP 918
P PP P + P
Sbjct: 1224 LPPPPVKSPPPPAPVISP 1241
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 292 ALDELIQAVPRSRRPPLNSWIWTNAIEKMQ 381
ALD+++ +P+ RR L S TN + K+Q
Sbjct: 206 ALDDILNVIPKERRTFLFSATMTNKVSKLQ 235
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 259 GGDVELTKAFVALDELIQAVPRSRRP 336
GG++ L + A+D ++Q+VPR R P
Sbjct: 976 GGEIVLVSSSPAMDGVLQSVPRRRTP 1001
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 784 PXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPPXP 900
P P PP L PP P P L + P P P P
Sbjct: 1162 PSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/68 (27%), Positives = 24/68 (35%)
Frame = +1
Query: 715 PXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPP 894
P P+ KP P P P + P + + PP P+P P PN PP
Sbjct: 76 PNPDVPPMNKPDVPPMPKPDGP-PIPPVQPCPDQPPQPKPDGPPLPNPNQPPQPNPNGPP 134
Query: 895 XPGXQVXP 918
P P
Sbjct: 135 KPDMPPMP 142
>07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277
Length = 229
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3
Query: 447 SGASSGMDGPHRSGADGPQVVCDELDEETGRADEPXARPSLTAS 578
SG S G G SG +G + E TG ADE A PS++ S
Sbjct: 96 SGGSGGRAGSAGSGGNGGR---PGNSEATGAADEAVAAPSISCS 136
>03_06_0090 +
31570588-31570710,31570962-31571080,31572215-31572284,
31572544-31573492,31574789-31575699
Length = 723
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 417 REDAVXARRCSGASSGMDGPHR 482
RE+A AR CSG G G HR
Sbjct: 700 REEAAAARACSGCRRGRRGEHR 721
>01_01_0987 + 7803281-7803910,7803989-7804510
Length = 383
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = +3
Query: 297 GRVDSGRTEESTAPAQLLDLDECDRENANHRRTLQILCRIREDAVXARRCSGASSGMDGP 476
GR D R E++ A A R H TL+ CR A R S G DG
Sbjct: 166 GRDDDARREDTAAAATGSTTPGMSRLRHAHS-TLERHCRSHTPTTKADRTPRTSGGGDGG 224
Query: 477 HR 482
HR
Sbjct: 225 HR 226
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/60 (30%), Positives = 20/60 (33%)
Frame = +1
Query: 715 PXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPP 894
P P+ P T P T TPP + V PP P P P P PP
Sbjct: 223 PPPSPASPPPPSTATPPPPSPTPTTTRASPTPPPIPTATV-RPPPPLPRATVTPTPTTPP 281
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 28.3 bits (60), Expect = 9.2
Identities = 23/81 (28%), Positives = 27/81 (33%), Gaps = 1/81 (1%)
Frame = +1
Query: 661 PXPLXEIXXYAPXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTP-PKVVXXEVL 837
P P E A LDP P+ + P P P P +P P+ E
Sbjct: 97 PEPKAETDPEADPKPGLDPEPDTNVE--PDLELEPEPPPPRPMPIPTPSPRPRPPDPEPK 154
Query: 838 XPPXPSPXL*TXPXPNYPPXP 900
P P P L P P P P
Sbjct: 155 PDPEPDPELEPEPEPEPDPEP 175
>09_01_0083 + 1187861-1188340
Length = 159
Score = 28.3 bits (60), Expect = 9.2
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 258 RGRRRANKGFRGAGRV---DSGRTEESTAPAQLLDLDECDRENANHRRTLQILCRIREDA 428
R RRR +G GAGR+ D+GR ++E + RT + C +R
Sbjct: 89 RWRRRLRRGRGGAGRISCQDAGRRRSERG-----GVEERRLRGSGWMRT-EERC-LRRIG 141
Query: 429 VXARRCSGAS-SGMDGP 476
V A+ C G S + MDGP
Sbjct: 142 VQAKSCGGISCAWMDGP 158
>08_02_1360 + 26391141-26391287,26392256-26392627,26393372-26393860
Length = 335
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 392 DITNTLPNSRGRXXGPALFRRQFGNGWTSPKRC 490
D+ L + R P RR+ G GWT+P +C
Sbjct: 301 DLAAVLRDWRNYTAAPPAARRRGGFGWTTPGKC 333
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 294 AGRVDSGRTEESTAPAQLLDLDECDRENANHRRTLQILCRIRE 422
A RVD +E P L++D CD N++H + +++ +++
Sbjct: 5 AVRVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKK 47
>05_03_0040 - 7646525-7647775
Length = 416
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/69 (27%), Positives = 23/69 (33%)
Frame = +1
Query: 712 DPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYP 891
+P P K KP + P +P P K P E P P P P P
Sbjct: 217 EPKPEPKPKPKPEPKPKPEPKP-YPEPKPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPE 275
Query: 892 PXPGXQVXP 918
P P + P
Sbjct: 276 PKPKPEPKP 284
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 841 PPXPSPXL*TXPXPNYPPXPGXQVXP 918
PP P L P PN PP P Q P
Sbjct: 262 PPSHPPALPALPAPNAPPPPAPQSQP 287
>03_06_0189 + 32214702-32215154
Length = 150
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = +1
Query: 694 PXAVXLDPX-PNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPS-PXL* 867
P A+ + P P P+ +P P T P VV PP P+ P +
Sbjct: 36 PAALPVLPAVPALPTTLPPMPAIPAVPQAALPPMPAVPTVPAVVPNAAALPPMPAVPAIP 95
Query: 868 TXPXPNYPPXP 900
P + PP P
Sbjct: 96 AVPKVSLPPMP 106
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 784 PXPXGKXTPPKVVXXEVLXPPXPSPXL*TXPXPNYPPXP 900
P P PP ++ PP P L P+ PP P
Sbjct: 967 PPPPPNVAPPPFTRQDIPPPPPSPPPLPITQPPSVPPPP 1005
>01_01_0237 - 1972699-1972796,1973618-1974334,1975387-1976191
Length = 539
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = -3
Query: 657 GXCXKSNGWXGHLAKGTH-----XCLPXCSMTRR*VTASP 553
G C K+ GW GH + H C ++T R T SP
Sbjct: 229 GDCEKAGGWCGHRRRAAHEPWTFACFRTVTITARADTKSP 268
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 9.2
Identities = 22/79 (27%), Positives = 26/79 (32%)
Frame = +1
Query: 691 APXAVXLDPXPNCTXKXKPLXXTRVLPXXTFPXPXGKXTPPKVVXXEVLXPPXPSPXL*T 870
A A P P P V P T P P K PP V + PP +P +
Sbjct: 53 ATPAPTATPTPPVAPAKAPPVAPAVAPV-TPPPPTPKKAPPPPVTPPPVTPPPVTPPPVS 111
Query: 871 XPXPNYPPXPGXQVXPXVS 927
P PP P V+
Sbjct: 112 PPPATPPPALPPSTPPPVA 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,723,220
Number of Sequences: 37544
Number of extensions: 545544
Number of successful extensions: 2120
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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