Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C15
(864 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 54 7e-07
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 54 7e-07
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 54 7e-07
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 54 7e-07
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 54 7e-07
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 54 7e-07
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 54 7e-07
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 51 6e-06
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 51 6e-06
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 51 6e-06
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 51 6e-06
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 44 0.001
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 36 0.25
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 36 0.25
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 36 0.25
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 36 0.25
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 36 0.25
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 36 0.25
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 36 0.25
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 36 0.25
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 36 0.25
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 36 0.25
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 31 4.1
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 12 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 57
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG H + +KIR S FRRPKT PKYPRK P
Sbjct: 21 ALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAP 66
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG HG + +KIR S F+RPKT P+YPRK P
Sbjct: 21 ALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTP 66
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG HG + +KIR S F+RPKT P+YPRK P
Sbjct: 21 ALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTP 66
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG HG + +KIR S F+RPKT P+YPRK P
Sbjct: 21 ALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTP 66
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 50.8 bits (116), Expect = 6e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ V+KG HG + +KIR S F+RPKT P+YPRK P
Sbjct: 21 ALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTP 66
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 43.6 bits (98), Expect = 0.001
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 723 ALKAQRKVVKGEHGXRVRKIRNSVHFRRPKTFEPPXHPKYPRKXLP 860
ALKA++ +KG H +K R S+ F+RPKT P+YP K P
Sbjct: 21 ALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTP 66
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 46 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 365 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 383 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 434
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 46 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 365 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 46 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 365 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 46 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 365 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 35.5 bits (78), Expect = 0.25
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 862 LGRXFLGYLGCXGGSNVLGLRKCTELRIFRTLFPCSPFTTFL*ALSAXVTGF 707
LG F GYLGC +VLG RK ++ I L+ + F T AL + GF
Sbjct: 365 LGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFLALQSLRFGF 416
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 789 SVHFRRPKTFEPPXHPKYPRKXLP 860
S+ FRRPKT P+YPRK P
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTP 25
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,136,941
Number of Sequences: 237096
Number of extensions: 971306
Number of successful extensions: 2273
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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