Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C13
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 65 2e-09
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 61 3e-08
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 58 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 57 5e-07
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 40 0.060
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.080
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 39 0.18
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.24
UniRef50_A7SPZ6 Cluster: Predicted protein; n=8; Nematostella ve... 36 1.7
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 4.0
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 34 5.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +3
Query: 738 FSIGSAPLTSITKIXAQXKGGETRKXYKXTRRFPLKXP 851
FSIGSAPLTSITKI AQ +GGETR+ YK TRRFPL+ P
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAP 53
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = +3
Query: 738 FSIGSAPLTSITKIXAQXKGGETRKXYKXTRRFPLKXP 851
FSIGSAPLTSITK AQ GGETR+ YK TRRFPL P
Sbjct: 52 FSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAP 89
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/38 (73%), Positives = 28/38 (73%)
Frame = -2
Query: 705 PFXGLLLTXSFLRYPLILWITVLPPLSEXIPLAAAERP 592
P LLT SF YPLILWITVLPPLSE PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 505 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYXL-TQRR*YGYPQNQGIXQ 672
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = +3
Query: 738 FSIGSAPLTSITKIXAQXKGGETRKXYKXTRRFPLKXP 851
FSIGSAPLTSI K AQ GGETR+ YK RRFPL P
Sbjct: 84 FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +1
Query: 529 RGEAVCVLGALPLPRSLTRCARSFGCGERYXLT 627
R +C G +PLPRSLTR ARSFGCGERY LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 40.3 bits (90), Expect = 0.060
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 738 FSIGSAPLTSITKIXAQXKGGETRKXYKXTRRFPLKXP 851
F S PLT+ITKI Q K +T+ YK T FPL+ P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSP 106
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.080
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 575 ERGSGRAPNTQTASPRALADSLMQ 504
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 38.7 bits (86), Expect = 0.18
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 308 DPXMIXYIDEFGQTTTKMQ 364
DP MI YIDEFGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.24
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 503 SALMNRPTXGERRFAYW 553
+ALMNRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_A7SPZ6 Cluster: Predicted protein; n=8; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 74
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 175 PRTAMCVRNVDVQXWPAVHTMTRS*LRAAXTREPSXPPXR 56
P++A+CV+ D A+HT R+ LR++ EP PP +
Sbjct: 6 PKSAICVQRFDDSLNSAIHTTYRTWLRSSSMHEPRDPPLK 45
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -2
Query: 714 GSWPFXGLLLTXSFLRYP---LILWITVLPPLSEXIPLAAAERP 592
G W G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 630 KAVIRLSTESGDXAGKXM 683
KAVIRLSTESGD AGK M
Sbjct: 42 KAVIRLSTESGDNAGKNM 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,270,306
Number of Sequences: 1657284
Number of extensions: 10462990
Number of successful extensions: 22011
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22009
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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