Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C09
         (1338 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.019
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   5.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   6.5  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.1 bits (72), Expect = 0.019
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = -1

Query: 174 PXAXXGPXXXXXGGXXPRXGGARGRXXPPXXXNPXPXRPLXXAGGRXPXXXPR 16
           P    G       G  PR   A+G   PP    P P RP    GG  P   P+
Sbjct: 230 PQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQ 282



 Score = 24.2 bits (50), Expect = 8.7
 Identities = 17/63 (26%), Positives = 17/63 (26%), Gaps = 1/63 (1%)
 Frame = +1

Query: 223 PPHPRXXAPXGGRAXXXXXXXXXXPXXPXXXGRXXXPPAG-PXTXAPXRXGXPTPPPXGA 399
           PP     AP               P      G    P  G P    P R G   P P G 
Sbjct: 165 PPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGV 224

Query: 400 PXP 408
           P P
Sbjct: 225 PMP 227


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 19/58 (32%), Positives = 19/58 (32%)
 Frame = -3

Query: 289 GGGGXXVXXPVRPSVXXXGGGAXPGXRXXGPXAGXGXXAAGXGXPLPXGXGGRXAPXG 116
           GGG        R      GGG   G    G   G G    G G     G GGR A  G
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGD--RNGDGGRPAYSG 113


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = -3

Query: 286 GGGXXVXXPVRPSVXXXGGGAXPGXRXXGPXAGXGXXAAGXGXPLPXGXGG 134
           GGG  +      ++   GGGA  G    G   G G  ++G G       GG
Sbjct: 824 GGGFLITGDPSDTIGAGGGGA--GGPLRGSSGGAGGGSSGGGGSGGTSGGG 872



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -3

Query: 289 GGGGXXVXXPVRPSVXXXGGGAXPGXRXXGPXAG 188
           G GG     P+R S    GGG+  G    G   G
Sbjct: 838 GAGGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.137    0.454 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,203
Number of Sequences: 2352
Number of extensions: 7850
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 153617310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)