Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C07
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   2.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.8  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   6.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   6.4  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = -1

Query: 723 NYKIX*VSINXYVSMNIGAHSEIXCFWNFPYSWKMSLGI 607
           NY +  ++I+  + + +G  +E+  FW   Y W + + +
Sbjct: 76  NYYLFSLAISDLILLVLGLPNELSLFWQ-QYPWVLGVSL 113


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 259 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 366
           QC  C+K     ++   +RR   + +P  C  C ++
Sbjct: 121 QCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERA 156



 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 259 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 357
           +C+ C+K    S     + R     KP VC  C
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 569 DQEELRHYDEHFLIPRDIFQE*GKFQKXKISECAPIFIE 685
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +2

Query: 569 DQEELRHYDEHFLIPRDIFQE*GKFQKXKISECAPIFIE 685
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,652
Number of Sequences: 438
Number of extensions: 4820
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)