Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C04
(925 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 33 0.24
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.32
09_04_0506 - 18188785-18190599 33 0.42
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 32 0.74
07_01_0479 + 3606663-3607448 32 0.74
07_03_0558 + 19461369-19462448 31 1.3
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 31 1.3
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.7
10_08_0213 - 15912048-15912716 30 2.3
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 30 3.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 3.0
10_08_0216 - 15942379-15942852,15942956-15943033 29 3.9
07_03_0177 - 14770777-14772045 29 3.9
08_02_0826 - 21583507-21583555,21584000-21584679 29 5.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.2
06_01_0145 + 1092764-1093351 29 5.2
03_06_0599 + 34984869-34985319,34986581-34987563 29 5.2
01_06_1236 + 35613123-35613816,35615809-35615952,35616032-356161... 29 5.2
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 5.2
10_08_0214 - 15915156-15915713 29 6.9
08_01_1038 + 10540185-10540709 29 6.9
07_03_1751 - 29215074-29216270 29 6.9
07_03_0560 + 19479597-19480667 29 6.9
06_01_0690 + 5033943-5034740 29 6.9
07_03_0559 + 19475893-19476783 28 9.1
05_04_0303 - 20010761-20011756 28 9.1
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 28 9.1
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.5 bits (73), Expect = 0.24
Identities = 23/89 (25%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = +3
Query: 486 PXPPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPP-KGGXTVXXRIRG*PQEKPCXXX 662
P PP G P +PP P PPP G T P+ P
Sbjct: 694 PPPPAPEGHMPSPPKSTPPVEKSPPTPESEASSPPPPAPEGHTPSP-----PKSSPPEEK 748
Query: 663 XXQRPXTRXKAPXLAFSXXPPPPXXTPPK 749
P T +P P PP +PP+
Sbjct: 749 SPPIPPTSHTSPPTPEEYTPSPPKSSPPE 777
Score = 31.5 bits (68), Expect = 0.98
Identities = 22/89 (24%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Frame = +3
Query: 486 PXPPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPPKGGXTVXXRIRG*PQEKPCXXXX 665
P PP G P +PP P + PPP T P+ P
Sbjct: 628 PPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPP----TPEGHTPSPPKSTPPTEKS 683
Query: 666 XQRPXTRXKA--PXLAFSXXPPPPXXTPP 746
P + + P P PP TPP
Sbjct: 684 PPTPESESSSPPPPAPEGHMPSPPKSTPP 712
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.32
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 486 PXPPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPPKGG 605
P PP KG P G P P + PPPKGG
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>09_04_0506 - 18188785-18190599
Length = 604
Score = 32.7 bits (71), Expect = 0.42
Identities = 25/88 (28%), Positives = 33/88 (37%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLGLSPDSXXNRXTPFGGR*Y 582
G G G GGGG G+GQ + GP+ G + G ++P G+ +
Sbjct: 325 GGGGGGNWGRGGGGMGGRGQAGNMRNRMGPVGGRGLMGNGGMVAPPPPMLHPGGMLGQGF 384
Query: 581 RXPXPXXRAXGXXGXGTGRXPXXXTAFP 498
P A G G G G P A P
Sbjct: 385 -DPTGYGAAMGRMGGGFGGFPGGPGAAP 411
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 31.9 bits (69), Expect = 0.74
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 706 PFPXXPPPPXXPLPKXPTPXXXGW 777
P P PPPP P P PTP W
Sbjct: 82 PPPPPPPPPPPPPPLSPTPTTTSW 105
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.9 bits (69), Expect = 0.74
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 709 FPXXPPPPXXPLPKXPTPXXXGWANPXXPXQXXPG 813
FP PPPP P + P P P P PG
Sbjct: 197 FPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPG 231
>07_03_0558 + 19461369-19462448
Length = 359
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 755 GXFGRG-XXGGGGXXGKGQXRGLXTGXGPLXGXXVTGF 645
G FG G GGGG G G GL G G L G GF
Sbjct: 44 GGFGEGEGFGGGGGFGGGGGGGLGGGGGGLGGGHGGGF 81
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G GL GVG G GGGG G GQ G G G
Sbjct: 83 GGGGLGGGASGGVGGGGGFGGGGGGGLGGGQGGGFGGGAG 122
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLG 636
G G+ GVG G GGG G GQ G G G G G F G
Sbjct: 193 GGAGVGGGAGGGVGGGGGFGGGGGSGLGGGQGGGFGAGGGAGGGIGGGGGFGG 245
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G G GVG G GGGG G G GL G G
Sbjct: 289 GGHGSGFGGGAGVGGGAGGGVGGGGGFGGGGGGGLGGGHG 328
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G G G G GGGG G+G+ RG G G
Sbjct: 685 GGGGRGGGGGGGGGRGGRGRGRGRGRGRG 713
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G G GRG GGGG G+ RG G G
Sbjct: 683 GGGGGGRGGGGGGGGGRGGRGRGRGRGRG 711
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -3
Query: 812 PGXX*XGXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXG 663
PG G G G G GR GGGG G G+ G G G L G
Sbjct: 161 PGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGG 210
>10_08_0213 - 15912048-15912716
Length = 222
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G G +G G GGGG G G G G G
Sbjct: 109 GAGGYGSGGGGGGGGAGSGYGSGEGYGSG 137
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = -3
Query: 761 GVGXFGRG-XXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLG 636
G G +G G GGGG G G G +G G G F G
Sbjct: 69 GAGGYGHGGGGGGGGGEGGGSGSGYGSGQGSGSGYGSGAFGAG 111
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/85 (25%), Positives = 27/85 (31%)
Frame = +3
Query: 492 PPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPPKGGXTVXXRIRG*PQEKPCXXXXXQ 671
PP +G P P P + S PP G + P +P Q
Sbjct: 129 PPSQGPFGTAPPPSQGPFGTAPPPSQGPFAASVPPSQGPFASAQ----PPFRP-PPSLVQ 183
Query: 672 RPXTRXKAPXLAFSXXPPPPXXTPP 746
P AP A+ PPP PP
Sbjct: 184 SPTASGMAPPSAYVRPPPPVQSQPP 208
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 706 PFPXXPPPPXXPLPKXPTPXXXGWANPXXP 795
P P PPPP P P P P A P P
Sbjct: 360 PPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>10_08_0216 - 15942379-15942852,15942956-15943033
Length = 183
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 773 PWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
P+ G G G G GGGG G G G GP G +G
Sbjct: 107 PYASGGGGGGAGG-GGGGGYGYGAGGGYGQAGGPYYGPYASG 147
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 746 GRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
G G GGGG G G G GP G +G
Sbjct: 79 GGGGGGGGGGYGYGAGGGYGQAGGPYYGPYASG 111
>07_03_0177 - 14770777-14772045
Length = 422
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLG 636
G G G+G G G GGGG GKG G+ G G G G F G
Sbjct: 81 GGGGFGGGGGGGLGGGGGGGLGGGGGFGKG--GGVGGGFGKGGGFGKGGGFGG 131
>08_02_0826 - 21583507-21583555,21584000-21584679
Length = 242
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTG 681
GVG G G GGGG G G G +G
Sbjct: 62 GVGIGGGGGGGGGGGSGSGSYSGSGSG 88
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 721 PPPPXXPLPKXPTPXXXGWANPXXPXQXXP 810
PPPP PLP P P A P P Q P
Sbjct: 1181 PPPPPPPLPSGPPPQP---APPPLPIQPPP 1207
>06_01_0145 + 1092764-1093351
Length = 195
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G G G G GRG GG G G+G RG G G
Sbjct: 148 GRGGRGGSGGFGGGDGGRGGRGGDGGEGRGGGRGGDGGEG 187
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 712 PXXPPPPXXPLPKXPTPXXXGWANPXXPXQ 801
P PPPP P P P P +P P Q
Sbjct: 396 PAPPPPPQPPPPPPPPPHQRETPSPSPPPQ 425
>01_06_1236 +
35613123-35613816,35615809-35615952,35616032-35616184,
35616572-35616687,35616800-35616967,35617647-35617707,
35617772-35617824,35618278-35618508,35618600-35618749
Length = 589
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXR 696
GVG G G GGGG G GQ R
Sbjct: 37 GVGGGGGGGGGGGGGGGAGQKR 58
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = -3
Query: 755 GXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLGLSPDSXXNRXTPFGG 591
G G G GGGG G GL G G TGF +G P + T GG
Sbjct: 234 GGGGEGNTGGGGGGGGNCGLGLGFGEG-------TGFGVGAGPGAGTGAITGGGG 281
>10_08_0214 - 15915156-15915713
Length = 185
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
G G +G G GGGG G G +G G G G
Sbjct: 107 GAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGG 144
>08_01_1038 + 10540185-10540709
Length = 174
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
G+G G G GGGG GKG RG G G
Sbjct: 25 GLGG-GSGLGGGGGGLGKGGVRGGGGGLG 52
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
GVG G G GGG G G G+ G G G + G
Sbjct: 60 GVGVGGGGGFGGGAGGGLGHGGGIGGGFGGGKGGGLGG 97
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -3
Query: 785 GLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
GL G+G G G GGGG G G G G G G + G
Sbjct: 123 GLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGG 168
>06_01_0690 + 5033943-5034740
Length = 265
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 785 GLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
G A+ G G G G GG G G G G GP G G
Sbjct: 146 GGAYAQGGGGGGGGGGGQNGGSGYGSGSGYGQAGGYGPYGGGYAQG 191
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTG 648
G G A G+G G G GGGG G G G G G G + G
Sbjct: 191 GGVGGAAGGGGGMGSGGGGGFGGGGGKGGGFGAGGVMGGGAGGGGGLGG 239
>05_04_0303 - 20010761-20011756
Length = 331
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 761 GVGXFGRGXXGGGGXXGKGQXRG 693
GVG G G GGGG G G+ G
Sbjct: 61 GVGGGGGGGGGGGGGVGAGEMNG 83
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 712 PXXPPPPXXPLPKXPTPXXXGWANPXXPXQXXP 810
P PPPP +P P P G P P P
Sbjct: 47 PQPPPPPYQVMPVPPPPPPVGLPVPPLPATMAP 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,296,146
Number of Sequences: 37544
Number of extensions: 224132
Number of successful extensions: 3208
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2677
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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