Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C04
         (925 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    33   0.73 
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    33   0.73 
AY075501-1|AAO39496.1|  299|Drosophila melanogaster RE52135p pro...    31   2.2  
AE013599-3129|AAF46672.1|  237|Drosophila melanogaster CG4038-PA...    31   2.2  
BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    30   3.9  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    30   3.9  
X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.     30   5.2  
BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p pro...    30   5.2  
AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA topoisom...    30   5.2  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    30   5.2  
AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-P...    30   5.2  
AM294881-1|CAL26867.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294880-1|CAL26866.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294879-1|CAL26865.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294878-1|CAL26864.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294877-1|CAL26863.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294875-1|CAL26861.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294874-1|CAL26860.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AM294872-1|CAL26858.1|  158|Drosophila melanogaster CG10853 prot...    29   6.8  
AE014297-3551|AAF56299.2|  290|Drosophila melanogaster CG13615-P...    29   9.0  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 0.73
 Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
 Frame = +3

Query: 486 PXPPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPPKGGXTVXXRIRG*PQEKPCXXXX 665
           P P    G        +PP     P  + R    P P  G T   R    P   P     
Sbjct: 302 PPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPS-PPAPPAPTYQ 360

Query: 666 XQRPXTRXKAPXLAFSXXPP-PPXXTP 743
            Q P     AP   +   PP PP  TP
Sbjct: 361 PQPPAPPAPAPGPTYQPRPPAPPAPTP 387


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 0.73
 Identities = 24/87 (27%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
 Frame = +3

Query: 486 PXPPGKGGXXXGXPSGSPPXXXXRPXXRXRXXVSPPPKGGXTVXXRIRG*PQEKPCXXXX 665
           P P    G        +PP     P  + R    P P  G T   R    P   P     
Sbjct: 302 PPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPTYQPRPPS-PPAPPAPTYQ 360

Query: 666 XQRPXTRXKAPXLAFSXXPP-PPXXTP 743
            Q P     AP   +   PP PP  TP
Sbjct: 361 PQPPAPPAPAPGPTYQPRPPAPPAPTP 387


>AY075501-1|AAO39496.1|  299|Drosophila melanogaster RE52135p
           protein.
          Length = 299

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -3

Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           G  G    +  G G  GRG  GGGG  G G  RG   G G
Sbjct: 9   GGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFG 48


>AE013599-3129|AAF46672.1|  237|Drosophila melanogaster CG4038-PA
           protein.
          Length = 237

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -3

Query: 794 GXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           G  G    +  G G  GRG  GGGG  G G  RG   G G
Sbjct: 9   GGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFG 48


>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 706 PFPXXPPPPXXPLPKXPTPXXXGWANPXXP 795
           P P  PPPP  P P  P P    +  P  P
Sbjct: 241 PPPPPPPPPSYPYPPYPYPPPGPYPGPWIP 270


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 706 PFPXXPPPPXXPLPKXPTPXXXGWANPXXP 795
           P P  PPPP  P P  P P    +  P  P
Sbjct: 243 PPPPPPPPPSYPYPPYPYPPPGPYPGPWIP 272


>X71975-1|CAA50795.1|  239|Drosophila melanogaster GCR 101 protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -3

Query: 761 GVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           G G  GRG  GGGG  G G  RG   G G
Sbjct: 18  GGGGGGRGFGGGGGGRGGGGGRGGGGGFG 46


>BT015282-1|AAT94511.1| 1250|Drosophila melanogaster LD04601p
           protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 20/62 (32%), Positives = 21/62 (33%)
 Frame = -3

Query: 812 PGXX*XGXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLGL 633
           PG    G    +  W  G G  G G  GG G  G G   G   G G   G    G   G 
Sbjct: 779 PGGGGSGRGAGSGGWSSGPGGGGSGGGGGSGGWGSGTGGGGSGGWGSGTGGGGLGGGKGK 838

Query: 632 SP 627
            P
Sbjct: 839 KP 840


>AF255733-1|AAF71288.1| 1250|Drosophila melanogaster DNA
           topoisomerase III alpha protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 20/62 (32%), Positives = 21/62 (33%)
 Frame = -3

Query: 812 PGXX*XGXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLGL 633
           PG    G    +  W  G G  G G  GG G  G G   G   G G   G    G   G 
Sbjct: 779 PGGGGSGRGAGSGGWSSGPGGGGSGGGGGSGGWGSGTGGGGSGGWGSGTGGGGLGGGKGK 838

Query: 632 SP 627
            P
Sbjct: 839 KP 840


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 21/76 (27%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
 Frame = +3

Query: 525 PSGSPPXXXXRPXXRXRXXVSPP--PKGGXTVXXRIRG*PQEKPCXXXXXQRPXTRXKAP 698
           P   PP    R        + P   P    TV   +R  P+  P       RP T    P
Sbjct: 360 PPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPPTRPPTTYLPP 419

Query: 699 XLAFSXXPPPPXXTPP 746
               +  PPPP   PP
Sbjct: 420 PTVRTTRPPPPPTRPP 435


>AE014134-3114|AAF53813.2| 1250|Drosophila melanogaster CG10123-PA
           protein.
          Length = 1250

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 20/62 (32%), Positives = 21/62 (33%)
 Frame = -3

Query: 812 PGXX*XGXXGLAHPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXGPLXGXXVTGFFLGL 633
           PG    G    +  W  G G  G G  GG G  G G   G   G G   G    G   G 
Sbjct: 779 PGGGGSGRGAGSGGWSSGPGGGGSGGGGGSGGWGSGTGGGGSGGWGSGTGGGGLGGGKGK 838

Query: 632 SP 627
            P
Sbjct: 839 KP 840


>AM294881-1|CAL26867.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEGGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294880-1|CAL26866.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEGGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294879-1|CAL26865.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEGGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294878-1|CAL26864.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEEGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294877-1|CAL26863.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEEGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294875-1|CAL26861.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEGGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294874-1|CAL26860.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEGGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AM294872-1|CAL26858.1|  158|Drosophila melanogaster CG10853
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 776 HPWXXGVGXFGRGXXGGGGXXGKGQXRGLXTGXG 675
           +P   G G  G G  GGGG  G G   G  +G G
Sbjct: 51  YPKEEGGGGGGGGGSGGGGGGGSGSGGGSGSGDG 84


>AE014297-3551|AAF56299.2|  290|Drosophila melanogaster CG13615-PA
           protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +1

Query: 706 PFPXXPPPPXXPLPKXPTPXXXGW-ANP 786
           P P  PPPP  P P  P P   G  ANP
Sbjct: 73  PPPPPPPPPPPPPPPPPPPSPPGVPANP 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,683,237
Number of Sequences: 53049
Number of extensions: 340909
Number of successful extensions: 3281
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2842
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)