Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C03
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 99 7e-20
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 76 1e-12
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 68 3e-10
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 57 7e-07
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 56 1e-06
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 54 6e-06
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 53 8e-06
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 50 8e-05
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 44 0.005
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.007
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 42 0.016
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 40 0.11
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 38 0.34
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 37 0.78
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 36 1.8
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 34 4.2
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 34 4.2
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 99 bits (238), Expect = 7e-20
Identities = 54/96 (56%), Positives = 57/96 (59%)
Frame = +2
Query: 194 MDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
+DDDVAVTGEKI+TILKAA V+VEPY PGLFA ALEGINV DLITN GSGV
Sbjct: 17 VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76
Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 77 PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGV 346
DDDVAVT EKISTI A VD+EPY PGLF ALEGINV DLITN GSGV
Sbjct: 28 DDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 68.9 bits (161), Expect = 2e-10
Identities = 40/58 (68%), Positives = 44/58 (75%)
Frame = +2
Query: 167 HVYTLLSSXMDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGS 340
+VY+ L + DDVAVT EKISTILKAA +VEPY LFA ALEGINV DLITN GS
Sbjct: 35 YVYSAL--ILVDDVAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 68.1 bits (159), Expect = 3e-10
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSG--VXXXXXXXX 370
DD+V VT +KI+ ++KAA V+VEP+ PGLFA AL +N+ LI N G+G
Sbjct: 18 DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPA 77
Query: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 78 GGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 56.8 bits (131), Expect = 7e-07
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVD-VEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV DL+ + GS
Sbjct: 17 DDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLLMSMGSPAPSAAVTSAV 76
Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 481
SDDD +GFGLFD
Sbjct: 77 PTAASATSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 56.0 bits (129), Expect = 1e-06
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = +2
Query: 248 AAVDVEPYXPGLFAXALEGINVPDLITNXGSGV 346
A VD+EPY P LFA ALEGINV DLITN GSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 53.6 bits (123), Expect = 6e-06
Identities = 32/95 (33%), Positives = 40/95 (42%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXXX 376
DD + +T E IS ++K A V+VE Y P LFA E N+ DLI N G+G
Sbjct: 17 DDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIMNVGAGGCGVARPVTTA 76
Query: 377 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
S+DDM GLFD
Sbjct: 77 APTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 53.2 bits (122), Expect = 8e-06
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAV-DVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
D+ + +T +K+ ++ AA V ++EP LFA ALEG +V DL+ N GSG
Sbjct: 17 DEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLLLNVGSG--GGAAPAAG 74
Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 75 GAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGS 340
D V VT E I I+ AA VEPY PGLFA AL NV D++ G+
Sbjct: 28 DGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSG 343
DD + VT + I ++KAA D++P+ P LFA AL+G ++ L++ GSG
Sbjct: 28 DDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDLGSLLSAVGSG 76
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 43.6 bits (98), Expect = 0.007
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAV-DVEPYXPGLFAXALEGINVPDLITNXGS 340
DD +T EK+ +L AA + DVEP LFA ALEG +V D++T S
Sbjct: 18 DDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDILTEVAS 66
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 42.3 bits (95), Expect = 0.016
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGI 307
+D V V +KI+T +KAA ++VEP+ PGLFA +L +
Sbjct: 31 NDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 39.5 bits (88), Expect = 0.11
Identities = 28/95 (29%), Positives = 38/95 (40%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXXX 376
D +V +T EK+ ++ A V+VE LFA ALEG ++ + N +
Sbjct: 16 DAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSAA----PAAAAAG 71
Query: 377 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 72 GAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 212 VTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGS 340
+T E I+T+L A + VE + P + A AL N+ DLI + GS
Sbjct: 26 ITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 36.7 bits (81), Expect = 0.78
Identities = 24/86 (27%), Positives = 32/86 (37%)
Frame = +2
Query: 224 KISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXXXXXXXXXXXX 403
KI IL++ +++E ALEG +V +LIT +
Sbjct: 21 KIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASG 80
Query: 404 XXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 81 DAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 35.5 bits (78), Expect = 1.8
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXXX 376
D + +T + + TI KAA +V+ ++A ALEG ++ ++++ +
Sbjct: 15 DAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---GPVAGAGA 71
Query: 377 XXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
SDDDMGFGLFD
Sbjct: 72 ASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGS 340
D++ T + +I AA V V+ LFA LEG NV +L+T GS
Sbjct: 17 DENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 197 DDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLI-TNXGS 340
+D+ + K++ I+KAA + VEP +F AL+G V DL+ N GS
Sbjct: 30 EDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNSGS 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,456,279
Number of Sequences: 1657284
Number of extensions: 7318486
Number of successful extensions: 13227
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13193
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -