Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C03
         (883 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    99   4e-21
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    99   4e-21
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    99   4e-21
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    97   2e-20
AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-P...    31   1.6  

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score =   99 bits (238), Expect = 4e-21
 Identities = 54/96 (56%), Positives = 57/96 (59%)
 Frame = +2

Query: 194 MDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
           +DDDVAVTGEKI+TILKAA V+VEPY PGLFA ALEGINV DLITN GSGV         
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
                                    SDDDMGFGLFD
Sbjct: 77  PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score =   99 bits (238), Expect = 4e-21
 Identities = 54/96 (56%), Positives = 57/96 (59%)
 Frame = +2

Query: 194 MDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
           +DDDVAVTGEKI+TILKAA V+VEPY PGLFA ALEGINV DLITN GSGV         
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
                                    SDDDMGFGLFD
Sbjct: 77  PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score =   99 bits (238), Expect = 4e-21
 Identities = 54/96 (56%), Positives = 57/96 (59%)
 Frame = +2

Query: 194 MDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
           +DDDVAVTGEKI+TILKAA V+VEPY PGLFA ALEGINV DLITN GSGV         
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAA 76

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
                                    SDDDMGFGLFD
Sbjct: 77  PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 53/96 (55%), Positives = 56/96 (58%)
 Frame = +2

Query: 194 MDDDVAVTGEKISTILKAAAVDVEPYXPGLFAXALEGINVPDLITNXGSGVXXXXXXXXX 373
           +DDDVAVTGEKI+TILKAA V+VEPY PGLFA ALE INV DLITN GSGV         
Sbjct: 17  VDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAA 76

Query: 374 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 481
                                    SDDDMGFGLFD
Sbjct: 77  PAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>AE014297-2859|AAN13829.1|  819|Drosophila melanogaster CG31195-PA
           protein.
          Length = 819

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -3

Query: 299 PRLXRTDLAXMALHLQPPLSRWWKFSHQLRXHHHPXRMRAEYTH 168
           PR  R D     +HLQ  +S W  F  Q    HHP  +  +YTH
Sbjct: 167 PRTFRLDDFNDPIHLQK-ISTWNTFDVQDLGAHHPDSISKDYTH 209


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,942,666
Number of Sequences: 53049
Number of extensions: 379091
Number of successful extensions: 672
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)