Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_C02
         (1167 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.34 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.80 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 0.34
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 700 GXGGXGGRXXXGXGAGRGXVXGRXXXXAXGG 608
           G GG GGR   G G GRG   GR      GG
Sbjct: 65  GGGGRGGRGGRGGGRGRG--RGRGGRDGGGG 93


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.80
 Identities = 26/101 (25%), Positives = 28/101 (27%)
 Frame = +3

Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
           P P   P  Q  RPP          P  P  P  G      P P G              
Sbjct: 181 PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGM---YPQPPGVPMPMRP------- 230

Query: 582 XXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
                  + PP A    +P   PRP       RPP    PP
Sbjct: 231 -------QMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPP 264


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = -1

Query: 924 GRGGWXXXXGVRVXAXXVGSCWLRGXGAXGVXXXGAGGXGVARCXXGVLXXPXGXRXXXX 745
           G GG     G  V +  +GS  L G G  G    G G  G+     G      G      
Sbjct: 654 GGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGMM 713

Query: 744 XXGXGV 727
             G GV
Sbjct: 714 STGAGV 719


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.130    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,233
Number of Sequences: 2352
Number of extensions: 6087
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 131616534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)