Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_C02
(1167 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 42 8e-04
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 37 0.031
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 0.050
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 0.050
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 0.051
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.055
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.055
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.055
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.055
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.055
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 35 0.096
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.096
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 34 0.22
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.51
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.68
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.68
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.68
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.89
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.6
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 1.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 31 2.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 2.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 26 2.1
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 25 2.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 3.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.6
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 3.6
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 30 3.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 4.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 4.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 6.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 6.3
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 6.3
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 29 6.3
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.3
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 8.3
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 8.3
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 8.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 8.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 8.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 8.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 8.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 8.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 8.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 8.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 8.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 8.3
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 8.3
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 41.9 bits (94), Expect = 8e-04
Identities = 41/171 (23%), Positives = 53/171 (30%), Gaps = 7/171 (4%)
Frame = +3
Query: 372 TAXPRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXX 551
+A P+Q P P P P P A A P+P P + P P
Sbjct: 42 SAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPA----- 96
Query: 552 XXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXH 731
+ PP A PAP P Q +PP PP PP +
Sbjct: 97 ----PPPAPYPQHAVPAPAPPPAPYPQHAV----PAPAPYQQQPPPPPPPPHYPPPPPHY 148
Query: 732 XXPXPXXXXG---PXTXRPARXTXTA----PHXPRQRPXXXHPTHRSHATN 863
P P RPA +A P P+Q+P + H+ N
Sbjct: 149 PPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQQQPPQYPQQRQQHSYN 199
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/89 (23%), Positives = 24/89 (26%)
Frame = +3
Query: 642 TXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPRQR 821
T P AP +PP PP PP P P P + P
Sbjct: 13 TYPESAPAATTPQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPY 72
Query: 822 PXXXHPTHRSHATNTTQXXTXRPAXPXXP 908
P P + Q PA P P
Sbjct: 73 PQHAVPAPAPPLASYPQNAVPVPAPPPAP 101
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 36.7 bits (81), Expect = 0.031
Identities = 24/74 (32%), Positives = 24/74 (32%)
Frame = -3
Query: 823 GRWRGWCGAVXVXRAGRSVWGPXXXXGXGXXCXXACXVXXGGXGGXGGRXXXGXGAGRGX 644
GRW GW G G WG G G G GG G G G GRG
Sbjct: 30 GRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGN--WGGNGGGRGD 87
Query: 643 VXGRXXXXAXGGXR 602
G GG R
Sbjct: 88 WGGNGGGGRGGGGR 101
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect(2) = 0.050
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPA---RQDAPPP 533
PP P P APP+P P G A APPP
Sbjct: 203 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPP 236
Score = 24.6 bits (51), Expect(2) = 0.050
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 648 PRPAPXPXQXRPPXPPXPP 704
P P P PP PP PP
Sbjct: 236 PPPLPPVGAGAPPPPPPPP 254
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect(2) = 0.050
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPA---RQDAPPP 533
PP P P APP+P P G A APPP
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPP 222
Score = 24.6 bits (51), Expect(2) = 0.050
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 648 PRPAPXPXQXRPPXPPXPP 704
P P P PP PP PP
Sbjct: 222 PPPLPPVGAGAPPPPPPPP 240
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect(2) = 0.051
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPA---RQDAPPP 533
PP P P APP+P P G A APPP
Sbjct: 189 PPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPP 222
Score = 24.6 bits (51), Expect(2) = 0.051
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 648 PRPAPXPXQXRPPXPPXPP 704
P P P PP PP PP
Sbjct: 222 PPPLPPVGAGAPPPPPPPP 240
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.055
Identities = 26/101 (25%), Positives = 27/101 (26%), Gaps = 3/101 (2%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P TP PP P + P PP P GP PP
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 582 XXNXXXGRXP---PXAXXXXRPXTXPRPAPXPXQXRPPXPP 695
R P P P P P P RPP PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 34.7 bits (76), Expect = 0.13
Identities = 26/109 (23%), Positives = 28/109 (25%), Gaps = 1/109 (0%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPS-PXXPDXGPARQDAPPPXGXXXXXX 557
P TP P P + PP P PP P P P + PP G
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 558 XXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
P A P P P P PP PP
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXR-PPXPPXPPXXT 713
P PRP P P PP PP PP T
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRT 307
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.055
Identities = 26/101 (25%), Positives = 27/101 (26%), Gaps = 3/101 (2%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P TP PP P + P PP P GP PP
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 582 XXNXXXGRXP---PXAXXXXRPXTXPRPAPXPXQXRPPXPP 695
R P P P P P P RPP PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 34.7 bits (76), Expect = 0.13
Identities = 26/109 (23%), Positives = 28/109 (25%), Gaps = 1/109 (0%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPS-PXXPDXGPARQDAPPPXGXXXXXX 557
P TP P P + PP P PP P P P + PP G
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 558 XXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
P A P P P P PP PP
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXR-PPXPPXPPXXT 713
P PRP P P PP PP PP T
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRT 317
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.055
Identities = 36/133 (27%), Positives = 36/133 (27%), Gaps = 5/133 (3%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P P PP P A P PP P P PPP G
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPP--------- 291
Query: 582 XXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPP----XPPXPPXXTXXAXXHXXPXPX 749
G PP P T P P PP PP PP A P
Sbjct: 292 ---PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 750 XXXG-PXTXRPAR 785
G P T RP R
Sbjct: 349 PPTGSPPTGRPPR 361
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 677 PPPXPAXXAXXNXAXXXTPXPXXXXXXRXPXGXXSTPXXHRATPXPPAPXXXTPXAPXPR 856
PPP PA + P P P G P + P PP P P P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 857 NQ 862
Q
Sbjct: 315 PQ 316
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.055
Identities = 36/133 (27%), Positives = 36/133 (27%), Gaps = 5/133 (3%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P P PP P A P PP P P PPP G
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPP--------- 312
Query: 582 XXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPP----XPPXPPXXTXXAXXHXXPXPX 749
G PP P T P P PP PP PP A P
Sbjct: 313 ---PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 750 XXXG-PXTXRPAR 785
G P T RP R
Sbjct: 370 PPTGSPPTGRPPR 382
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 677 PPPXPAXXAXXNXAXXXTPXPXXXXXXRXPXGXXSTPXXHRATPXPPAPXXXTPXAPXPR 856
PPP PA + P P P G P + P PP P P P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 857 NQ 862
Q
Sbjct: 336 PQ 337
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.055
Identities = 36/133 (27%), Positives = 36/133 (27%), Gaps = 5/133 (3%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P P PP P A P PP P P PPP G
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPP-PPRTGSPPPPPTGSPPPPPAGGSPPP--------- 297
Query: 582 XXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPP----XPPXPPXXTXXAXXHXXPXPX 749
G PP P T P P PP PP PP A P
Sbjct: 298 ---PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 750 XXXG-PXTXRPAR 785
G P T RP R
Sbjct: 355 PPTGSPPTGRPPR 367
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 677 PPPXPAXXAXXNXAXXXTPXPXXXXXXRXPXGXXSTPXXHRATPXPPAPXXXTPXAPXPR 856
PPP PA + P P P G P + P PP P P P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 857 NQ 862
Q
Sbjct: 321 PQ 322
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.096
Identities = 42/189 (22%), Positives = 54/189 (28%), Gaps = 13/189 (6%)
Frame = +3
Query: 372 TAXPRQXXXTPAPXXTPXNQXXRPPTPXAXXXP----XAPPSPXXPDXGPARQDAPPP-- 533
+A +Q P P TP Q PP P P APP P P +Q+ P P
Sbjct: 288 SAPVQQAPPKPVPQQTPPVQ-QAPPKPAVQQAPTRAAPAPPKPAPQQAPPVQQNPPKPAV 346
Query: 534 ---XGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXP---P 695
+ PP P P+ PP P
Sbjct: 347 QQAQAPVVQQAPAPPVQQAPPKPTPQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQ 406
Query: 696 XPPXXTXXAXXHXXPXPXXXXG-PXTXRPARXTXTAPHXPRQRPXXXHPTHRSHATNTTQ 872
PP P P P T + A T+P P Q P PT ++ + +
Sbjct: 407 APPVQQNPPKPTPSPAPPAQKAQPVTQQQASAPPTSPSAPVQAPNT--PTQKASSQDPIV 464
Query: 873 XXTXRPAXP 899
P P
Sbjct: 465 QQDPPPKEP 473
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.096
Identities = 30/130 (23%), Positives = 31/130 (23%), Gaps = 2/130 (1%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXX 560
P + P TP P P P P P PD AP P G
Sbjct: 135 PGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPSGP 194
Query: 561 XXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXP--PXPPXXTXXAXXHX 734
G P P PA P PP P P A
Sbjct: 195 AGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPG 254
Query: 735 XPXPXXXXGP 764
P P GP
Sbjct: 255 PPGPAGAPGP 264
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.22
Identities = 29/123 (23%), Positives = 29/123 (23%), Gaps = 2/123 (1%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P TP P P P P P PD AP P G
Sbjct: 143 PCEAKTPPPCQPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGND 202
Query: 582 XXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXP--PXPPXXTXXAXXHXXPXPXXX 755
G P P PA P PP P P A P P
Sbjct: 203 GAAGTPGPDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGA 262
Query: 756 XGP 764
GP
Sbjct: 263 PGP 265
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.22
Identities = 28/106 (26%), Positives = 30/106 (28%), Gaps = 8/106 (7%)
Frame = +3
Query: 420 PXNQXXRPPTPXAXXXPX--APPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXXNX 593
P + PPT A P APP P P APPP
Sbjct: 170 PTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVT 229
Query: 594 XXGRXPPXAXXXX------RPXTXPRPAPXPXQXRPPXPPXPPXXT 713
PP +P PAP P P PP PP T
Sbjct: 230 APAPNPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPPPANT 275
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.51
Identities = 38/162 (23%), Positives = 46/162 (28%), Gaps = 6/162 (3%)
Frame = +3
Query: 387 QXXXTPAPXXTPXNQXXRPPT-PXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXX 563
Q P+P ++ +P P P PPSP GP P
Sbjct: 144 QPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSP-----GPVDPSEDPQPSGSSSPGPV 198
Query: 564 XXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPX-----PXQXRPPXPPXPPXXTXXAXX 728
+ P +P P P P P PP PP PP
Sbjct: 199 DPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRR-- 256
Query: 729 HXXPXPXXXXGPXTXRPARXTXTAPHXPRQRPXXXHPTHRSH 854
P GP T RP P P +RP P H+ H
Sbjct: 257 -----PPGPPGPPTRRPPGP----PGPPTRRP----PGHQGH 285
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.68
Identities = 29/126 (23%), Positives = 30/126 (23%), Gaps = 4/126 (3%)
Frame = +3
Query: 399 TPA-PXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXX 575
TP P P PP P PP P P P G
Sbjct: 130 TPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG 189
Query: 576 XXXXNXXXGRXPPXAXXXXRPXTXPRP--APX-PXQXRPPXPPXPPXXTXXAXXHXXPXP 746
G P + P AP P PP PP PP P P
Sbjct: 190 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 249
Query: 747 XXXXGP 764
GP
Sbjct: 250 KGAPGP 255
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 32.3 bits (70), Expect = 0.68
Identities = 29/126 (23%), Positives = 30/126 (23%), Gaps = 4/126 (3%)
Frame = +3
Query: 399 TPA-PXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXX 575
TP P P PP P PP P P P G
Sbjct: 125 TPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG 184
Query: 576 XXXXNXXXGRXPPXAXXXXRPXTXPRP--APX-PXQXRPPXPPXPPXXTXXAXXHXXPXP 746
G P + P AP P PP PP PP P P
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
Query: 747 XXXXGP 764
GP
Sbjct: 245 KGAPGP 250
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 32.3 bits (70), Expect = 0.68
Identities = 29/126 (23%), Positives = 30/126 (23%), Gaps = 4/126 (3%)
Frame = +3
Query: 399 TPA-PXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXX 575
TP P P PP P PP P P P G
Sbjct: 125 TPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG 184
Query: 576 XXXXNXXXGRXPPXAXXXXRPXTXPRP--APX-PXQXRPPXPPXPPXXTXXAXXHXXPXP 746
G P + P AP P PP PP PP P P
Sbjct: 185 PPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
Query: 747 XXXXGP 764
GP
Sbjct: 245 KGAPGP 250
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 0.89
Identities = 22/95 (23%), Positives = 27/95 (28%)
Frame = +3
Query: 420 PXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXXNXXX 599
P + + P P +PP P P A +PPP
Sbjct: 103 PGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPP- 161
Query: 600 GRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
P + P T P P P PP P PP
Sbjct: 162 --MTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 4/86 (4%)
Frame = +3
Query: 654 PAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXT----XRPARXTXTAPHXPRQR 821
PAP PP PP A P P P T P R P P++R
Sbjct: 111 PAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR 170
Query: 822 PXXXHPTHRSHATNTTQXXTXRPAXP 899
P P+ T P P
Sbjct: 171 PPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPS--PXXPDXGPARQDAPPP 533
P + TP P P + P P PPS P P P PPP
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/95 (21%), Positives = 27/95 (28%)
Frame = +3
Query: 420 PXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXXNXXX 599
P P P PPSP P+ P + P P +
Sbjct: 567 PDETTDAPEEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPV 626
Query: 600 GRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
+ +P P P+P P + P P PP
Sbjct: 627 DPVTEASPLNPQPPPPPSPSPEP-EPEPKPPVTPP 660
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXT 713
P P P P P PP PP PP T
Sbjct: 1112 PVAAPVPVPTPFTIPPPVPPPPPTAT 1137
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.4 bits (53), Expect(2) = 1.8
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +3
Query: 426 NQXXRPPTPXAXXX-PXAPPSPXXPDXGPARQDAPPP 533
N PP P P PP P P +APPP
Sbjct: 486 NAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPP 522
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPP 704
P P P P P PP PP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPP 542
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 660 PXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPRQRP 824
P P PP PP P P P GP P + PH P P
Sbjct: 143 PPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGP-NGGPGQPGQPGPHGPNGHP 196
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 30.7 bits (66), Expect = 2.1
Identities = 22/76 (28%), Positives = 25/76 (32%)
Frame = +3
Query: 612 PXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXT 791
P A +P P P P P Q P P P A P P T PA T
Sbjct: 76 PTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAP-VQETPQVAPAPETPAPAPET 134
Query: 792 XTAPHXPRQRPXXXHP 839
AP ++ P P
Sbjct: 135 -PAPAPVQETPQVVAP 149
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 2.1
Identities = 26/108 (24%), Positives = 28/108 (25%)
Frame = +3
Query: 372 TAXPRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXX 551
T P Q P P P P P PP+P P GP PP G
Sbjct: 683 TQLPGQPRPAGLPPGVPPMFNLNAPPPPGI--PGYPPAPPPPGVGPPPPQGIPPMG---F 737
Query: 552 XXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPP 695
G PP P + P P P PP
Sbjct: 738 DPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 25.8 bits (54), Expect(2) = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Frame = +3
Query: 609 PPXAXXXXRPXTXPRPA--PXPXQXRPPXPPXPP 704
PP A P P P P P P PP PP
Sbjct: 93 PPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +3
Query: 444 PTPXAXXXPXAPPSPXXPDXGPA 512
P P P PP+P P PA
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPPPA 96
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 25.4 bits (53), Expect(2) = 2.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 405 APXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPP 533
+P P P P A P A P+P P G A PP
Sbjct: 110 SPATQPSMNGHHAPPPPAVSRPPAFPTP-PPSVGSAAPSIQPP 151
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 651 RPAPXPXQXRPPXPPXPP 704
RPAP P PP P P
Sbjct: 160 RPAPFPAAQPPPAPTPTP 177
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.7
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 600 GRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGP 764
G PP +P P P P P P P P H P P P
Sbjct: 94 GYVPPPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKP 148
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 654 PAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPAR 785
P+P P R P PP PP P P P PA+
Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAK 579
Score = 29.1 bits (62), Expect = 6.3
Identities = 27/102 (26%), Positives = 29/102 (28%)
Frame = +3
Query: 399 TPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXX 578
TP P +P R P+P P PSP D A P
Sbjct: 483 TPTPPPSP-QPVYRLPSPKPVT-PEPLPSPTITDVSLAIATPSPEESDDDQELILPSPEP 540
Query: 579 XXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
PP R T P P P R P PP PP
Sbjct: 541 SPVREPTPPPPP------REPTPREPTPEPEPVREPTPPPPP 576
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.7
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Frame = +3
Query: 642 TXPRPAPXPX-----QXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPH 806
T P P P P Q PP PP PP T A P P G T P++ T
Sbjct: 66 TPPPPPPPPPLISILQQAPPPPPPPPPPTLKA-----PPPPPILGLKT--PSKSLKTPTP 118
Query: 807 XPRQRPXXXHP-THRSHATNTTQ 872
P++ P P + T T Q
Sbjct: 119 RPKECPTSFLPKKEKKTKTRTVQ 141
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/83 (24%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 507 PARQDAPPPXGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXR-- 680
P R PPP + P A P P+P P +
Sbjct: 429 PTRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKS 488
Query: 681 -PPXPPXPPXXTXXAXXHXXPXP 746
PP PP PP T + P P
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 TPAPXXTPXNQXXRP---PTPXAXXXPXAPPSPXXPDXGPARQDAPPP 533
TP P P ++ P P P PP P P P+ PPP
Sbjct: 462 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 509
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P T A P P GP + AP P
Sbjct: 171 PAGPPGPSGAPGQKGPSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPG 230
Query: 816 Q 818
Q
Sbjct: 231 Q 231
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Frame = +3
Query: 366 RXTAXPRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAP-PSPXX----PDXGPARQDAPP 530
R A R P P P + +P A P AP P P P P Q APP
Sbjct: 165 RTAASTRTAISAPPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPP 224
Query: 531 P 533
P
Sbjct: 225 P 225
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.6
Identities = 29/118 (24%), Positives = 31/118 (26%), Gaps = 6/118 (5%)
Frame = +3
Query: 468 PXAPPSPXXPDX---GPARQDAPPPXGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRP 638
P APP P + PAR PPP N P A P
Sbjct: 555 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAP-NYGTPENRPHAVPPPPP 613
Query: 639 XTXPRP---APXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAP 803
P+ AP PP PP PP P P PA P
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLP 671
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.6
Identities = 29/118 (24%), Positives = 31/118 (26%), Gaps = 6/118 (5%)
Frame = +3
Query: 468 PXAPPSPXXPDX---GPARQDAPPPXGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRP 638
P APP P + PAR PPP N P A P
Sbjct: 381 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAP-NYGTPENRPHAVPPPPP 439
Query: 639 XTXPRP---APXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAP 803
P+ AP PP PP PP P P PA P
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLP 497
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/83 (24%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 507 PARQDAPPPXGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXR-- 680
P R PPP + P A P P+P P +
Sbjct: 436 PTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKS 495
Query: 681 -PPXPPXPPXXTXXAXXHXXPXP 746
PP PP PP T + P P
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPP 518
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +3
Query: 399 TPAPXXTPXNQXXRP---PTPXAXXXPXAPPSPXXPDXGPARQDAPPP 533
TP P P ++ P P P PP P P P+ PPP
Sbjct: 469 TPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 516
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.9 bits (64), Expect = 3.6
Identities = 25/123 (20%), Positives = 29/123 (23%), Gaps = 2/123 (1%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXX-PDXGPARQDAPPPXGXXXXXXXXXXXXX 578
P P P + P P P P P P P + P P
Sbjct: 193 PKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPE 252
Query: 579 XXXNXXXGRXP-PXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXX 755
P P +P P+P P P P P P P P
Sbjct: 253 PKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSK 312
Query: 756 XGP 764
P
Sbjct: 313 PNP 315
Score = 28.7 bits (61), Expect = 8.3
Identities = 24/102 (23%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXX 581
P P P + P P P P P P+ P + P
Sbjct: 221 PKPKPKPKPKPKPNPNPKPEPKPKPKPKPK-PEPKPKTKLKSEPKPKPKLKPKPKPNPKP 279
Query: 582 XXNXXXGRXP-PXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
N P P RP PRP P P P P P
Sbjct: 280 EPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRP 321
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 603 RXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXP 701
+ PP P P PAP PP PP P
Sbjct: 153 KTPPEKPKVEEPAPAPAPAPAAVAPAPPPPPEP 185
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/89 (24%), Positives = 24/89 (26%), Gaps = 1/89 (1%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXXNXXXG-RXPPX 617
PP P P PP P P P + P P G G + P
Sbjct: 148 PPKPPCQKCPPGPPGPAGP---PGPKGLPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPG 204
Query: 618 AXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
P P PP PP PP
Sbjct: 205 VPGEKGPTGEPGKVINGAPPGPPGPPGPP 233
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 4.8
Identities = 26/131 (19%), Positives = 29/131 (22%), Gaps = 3/131 (2%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXX 560
P Q P P PP P PP P P P G
Sbjct: 127 PGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGL 186
Query: 561 XXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQ---XRPPXPPXPPXXTXXAXXH 731
G+ P + P P + P PP PP
Sbjct: 187 PGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPP 246
Query: 732 XXPXPXXXXGP 764
P P GP
Sbjct: 247 GPPGPKGSPGP 257
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 609 PPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
PP P P+ P P PP PP PP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.5 bits (63), Expect = 4.8
Identities = 28/111 (25%), Positives = 30/111 (27%), Gaps = 1/111 (0%)
Frame = +3
Query: 588 NXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPX 767
N GR P P T P P P PP P PP P P GP
Sbjct: 118 NGNPGRPPKEPC---EPLTPPPCKPCPEG--PPGPAGPPGPDGNKGPLGPPGPPGPEGP- 171
Query: 768 TXRPARXTXTAPHXPRQRPXXXHPTHRSHATNTTQXXT-XRPAXPXXPXTR 917
P P P +P P + Q P P P R
Sbjct: 172 NGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPGQR 222
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 4.8
Identities = 26/131 (19%), Positives = 29/131 (22%), Gaps = 3/131 (2%)
Frame = +3
Query: 381 PRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXX 560
P Q P P PP P PP P P P G
Sbjct: 127 PGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDATPGL 186
Query: 561 XXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQ---XRPPXPPXPPXXTXXAXXH 731
G+ P + P P + P PP PP
Sbjct: 187 PGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPGAPGNDGPP 246
Query: 732 XXPXPXXXXGP 764
P P GP
Sbjct: 247 GPPGPKGSPGP 257
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical protein
F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 6.3
Identities = 33/161 (20%), Positives = 46/161 (28%), Gaps = 1/161 (0%)
Frame = +3
Query: 603 RXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPA 782
+ PP A P PAP + R PP P A P P R
Sbjct: 312 KSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAP------ARRRRSPSASKSPPPAPKRAK 365
Query: 783 RXTXTAPHXPRQRP-XXXHPTHRSHATNTTQXXTXRPAXPXXPXTRRDXTXRNQXXXXXX 959
+ + P R+ P P + ++ + P P RR ++
Sbjct: 366 SRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPK 425
Query: 960 XXXXXXXXPPXQRXXRXRRPRQXXXPXXXXXXXPTHTAXXP 1082
PP R R R P Q P P+ + P
Sbjct: 426 RAKSRSKSPPAPR--RRRSPSQSKSPAPRRRRSPSKSPQAP 464
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.1 bits (62), Expect = 6.3
Identities = 27/110 (24%), Positives = 30/110 (27%)
Frame = +3
Query: 375 AXPRQXXXTPAPXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXX 554
A P AP P + P P P AP + D G A P G
Sbjct: 406 APPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAPSA----DAGGYAAAAAPAGGGSYPA 461
Query: 555 XXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPP 704
+ G P A P P PAP P P P P
Sbjct: 462 KKRRVAR----DYAEGEAAPAAPAEPAPAPAPAPAPAPEAAPAPEPAPAP 507
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 1043 PXXXXPDPHXPXXXPTPAKNP 1105
P PDP P PTP KNP
Sbjct: 1030 PVAAKPDPKIPEVPPTPVKNP 1050
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/78 (21%), Positives = 21/78 (26%)
Frame = +3
Query: 612 PXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXT 791
P +P P+P P P P P P P P P T
Sbjct: 236 PKPMPIPKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKPKLKPKTKPKKNPV 295
Query: 792 XTAPHXPRQRPXXXHPTH 845
P ++ PTH
Sbjct: 296 PILKPIPPKKETYISPTH 313
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 703 GGXGGXGGRXXXGXGAGRGXVXGR 632
GG GG GGR G GRG GR
Sbjct: 330 GGRGGRGGRGGRGGRGGRGGRGGR 353
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 703 GGXGGXGGRXXXGXGAGRGXVXGR 632
GG GG GGR G GRG GR
Sbjct: 333 GGRGGRGGRGGRGGRGGRGGRGGR 356
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 6.3
Identities = 23/119 (19%), Positives = 25/119 (21%)
Frame = +3
Query: 408 PXXTPXNQXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXX 587
P P PP P PP P P +P G
Sbjct: 137 PPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKGPAGP 196
Query: 588 NXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGP 764
N G + P P PP P PP P GP
Sbjct: 197 NGNPGAPGSPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGPKGP 255
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 29.1 bits (62), Expect = 6.3
Identities = 29/127 (22%), Positives = 30/127 (23%), Gaps = 2/127 (1%)
Frame = +3
Query: 402 PAPXXTPXN--QXXRPPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXX 575
P P N Q RP P P P P P+ AP G
Sbjct: 145 PGPQGPTGNSGQPGRPGNPGRPGSPGTP-GPVGPNGASGDSGAPGNDGEKGEPGRPAQST 203
Query: 576 XXXXNXXXGRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXX 755
A P P Q PP PP PP A P
Sbjct: 204 PSTPGEPGNPGDAGATGAPGDDGAPGRDGQPGQSGPPGPPGPPGNVGEAGPPGKPGQPGL 263
Query: 756 XGPXTXR 776
GP R
Sbjct: 264 PGPQGER 270
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P + A P P GP + AP P
Sbjct: 175 PAGPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPG 234
Query: 816 Q 818
Q
Sbjct: 235 Q 235
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P + A P P GP + AP P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Query: 816 Q 818
Q
Sbjct: 234 Q 234
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P + A P P GP + AP P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Query: 816 Q 818
Q
Sbjct: 234 Q 234
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXG 539
PP P P PP P PA P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG 186
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P + A P P GP + AP P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Query: 816 Q 818
Q
Sbjct: 234 Q 234
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 636 PXTXPRPAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGPXTXRPARXTXTAPHXPR 815
P P P+ P Q P P P + A P P GP + AP P
Sbjct: 174 PAGPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSNGNAGAPGAPG 233
Query: 816 Q 818
Q
Sbjct: 234 Q 234
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXG 539
PP P P PP P PA P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG 186
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 8.3
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 778 GRSVWGPXXXXGXGXXCXXACXVXXGGXG-GXGGRXXXGXGAG--RGXVXGRXXXXAXGG 608
G S WG G G GG G G GGR G G G G GR GG
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGG 119
Query: 607 XR 602
R
Sbjct: 120 GR 121
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXP--XAPPSPXXPDXGPARQDAPPP 533
P P P PP P P PP P P P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXP--XAPPSPXXPDXGPARQDAPPP 533
P P P PP P P PP P P P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/65 (27%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = +3
Query: 600 GRXPPXAXXXXRPXTXPRPAPXPXQXRPPXPPXP----PXXTXXAXXHXXPXPXXXXGPX 767
G P P P P P P PP PP P P P P P
Sbjct: 28 GGCPTPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
Query: 768 TXRPA 782
RP+
Sbjct: 88 MPRPS 92
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXG 539
PP P P PP P PA P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG 186
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 441 PPTPXAXXXPXAPPSPXXPDXGPARQDAPPPXG 539
PP P P PP P PA P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAG 186
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXP--XAPPSPXXPDXGPARQDAPPP 533
P P P PP P P PP P P P PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 8.3
Identities = 21/97 (21%), Positives = 25/97 (25%)
Frame = +3
Query: 474 APPSPXXPDXGPARQDAPPPXGXXXXXXXXXXXXXXXXNXXXGRXPPXAXXXXRPXTXPR 653
+PP+P P GP ++ G P P
Sbjct: 507 SPPTPPPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPP 566
Query: 654 PAPXPXQXRPPXPPXPPXXTXXAXXHXXPXPXXXXGP 764
P P PP PP PP P P GP
Sbjct: 567 PLPQNLSGAPPPPP-PPPPMLGGPPPPPPPPGGLMGP 602
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 402 PAPXXTPXNQXXRPPTPXAXXXPXA-PPSPXXPDXGPARQDAPPP 533
P P +PP P A A PP P P PA AP P
Sbjct: 58 PVSYAIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAP 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.130 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,939,891
Number of Sequences: 27780
Number of extensions: 195505
Number of successful extensions: 2158
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3182509690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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