Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B22
(884 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 130 3e-29
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 87 4e-16
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 87 7e-16
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 63 1e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 50 1e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 130 bits (315), Expect = 3e-29
Identities = 68/104 (65%), Positives = 69/104 (66%)
Frame = +2
Query: 491 SKRPGTVKRPRCWRFSIXSAPLTSITKIDAQVXGGXTRQDYKDTXRFPLXAPSCALLFRP 670
SK+ T R RFSI SAPLTSITKIDAQV GG TRQDYKDT RFPL APSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 671 XRLPDTCPXFSLRXXXXFLIXXAVXXSXRXXXXAPXLXCVPXPP 802
RLPDTCP FSLR FLI AV S R AP PP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP 105
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 87.4 bits (207), Expect = 4e-16
Identities = 42/54 (77%), Positives = 44/54 (81%)
Frame = +2
Query: 509 VKRPRCWRFSIXSAPLTSITKIDAQVXGGXTRQDYKDTXRFPLXAPSCALLFRP 670
V+ PR RFSI SAPLTSITK DAQ+ GG TRQDYKDT RFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 86.6 bits (205), Expect = 7e-16
Identities = 42/56 (75%), Positives = 43/56 (76%)
Frame = +2
Query: 515 RPRCWRFSIXSAPLTSITKIDAQVXGGXTRQDYKDTXRFPLXAPSCALLFRPXRLP 682
RPR RFSI SAPLTSI K DAQ+ GG TRQDYKD RFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 420
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.9 bits (146), Expect = 1e-08
Identities = 39/60 (65%), Positives = 40/60 (66%)
Frame = -3
Query: 564 MLVRGAEXMEKRQQRGLFTVPGLLLAFCSHVLSCVXXLILWITVLPPLSELIPLAAAERP 385
MLVRGAE MEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 456
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 49.6 bits (113), Expect = 1e-04
Identities = 29/81 (35%), Positives = 32/81 (39%)
Frame = +3
Query: 612 IKIPXVSPXKLPXALSCSDPXXYRIPVXPSPFGXRXAFSXLXLXVXXXGXXPXLPXWXVC 791
+KI VS LP ALSCS+P RIPV P A S P W V
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 792 PXPPXXPTXXPXPXPIXXXST 854
PP PT P P + T
Sbjct: 92 KNPPFSPTAAPYPVTVHLSPT 112
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 45.6 bits (103), Expect = 0.002
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = +2
Query: 467 ERTCEQKASKRPGTVKRPRCWRFSIXSAPLTSITKIDAQVXGGXTRQDYKDTXRFPLXAP 646
+R + + + P T F S PLT+ITKI Q T+ +YK T FPL +P
Sbjct: 47 QRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSP 106
Query: 647 SCALLFRP 670
S +LLF P
Sbjct: 107 SYSLLFPP 114
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 296 SALMNRPTRGERRFAYW 346
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 37.1 bits (82), Expect = 0.59
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = +1
Query: 667 TLXXTGYLSXLLPSXXVXLSHXSXCXYXXXV 759
TL TGYLS LPS V LSH S C Y V
Sbjct: 7 TLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 109 MIXYIDEFGQTTTRMQ 156
MI YIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,898,755
Number of Sequences: 1657284
Number of extensions: 8776046
Number of successful extensions: 23121
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22787
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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