Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B20
         (906 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.45 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.45
 Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = -3

Query: 769 GGXGGGTXXYXXXGXXGR-GXXXXRWRXRXXTGPXGSG 659
           GG GGG   Y   G  GR G    R R R   G  G G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGG 92


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 500 SIKLIKKXXSLXSRWSGXVMNTKXXXXXSKNIEMAVDL 387
           +++L+KK  SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 21/65 (32%), Positives = 21/65 (32%)
 Frame = -1

Query: 876 PXXGGPGXXXPXXXPGVGGGXXXVRXXXXGXXXXXGGGXGGEXXXTXXXXRXVEVXXXXG 697
           P  GG G       PG GGG         G     GGG GG         R  E     G
Sbjct: 200 PGAGGGGSGG--GAPGGGGGSSG------GPGPGGGGGGGGRDRDHRDRDREREGGGNGG 251

Query: 696 GGQXG 682
           GG  G
Sbjct: 252 GGGGG 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,263
Number of Sequences: 2352
Number of extensions: 8010
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)