Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B19
(869 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812... 77 2e-14
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338 77 2e-14
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 77 2e-14
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 30 2.8
03_06_0599 + 34984869-34985319,34986581-34987563 29 3.7
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.7
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 29 4.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 6.4
08_01_0059 - 394001-394708 28 8.5
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 8.5
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 8.5
06_01_0931 + 7192519-7194075 28 8.5
03_05_0576 + 25765137-25766420 28 8.5
02_05_0405 + 28708077-28708391,28708478-28708573,28709030-287094... 28 8.5
>12_02_0486 +
19577507-19577568,19578119-19578218,19581128-19581214,
19581852-19581914
Length = 103
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +1
Query: 145 MGXANXWXSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICXQCFXXXAHXXGF 300
MG +N W SHP+ YG GSR CR C N HGLIRKYGL C QCF A GF
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52
>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
Length = 56
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +1
Query: 145 MGXANXWXSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICXQCFXXXAHXXGF 300
MG +N W SHP+ YG GSR CR C N HGLIRKYGL C QCF A GF
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +1
Query: 145 MGXANXWXSHPRXYGQGSRSCRSCSNRHGLIRKYGLNICXQCFXXXAHXXGF 300
MG +N W SHP+ YG GSR CR C N HGLIRKYGL C QCF A GF
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGF 52
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 514 FFFFXXAPXPPPKXXXPPPXPP 449
F F P PPP PPP PP
Sbjct: 33 FTFLCPPPPPPPPPPPPPPPPP 54
>03_06_0599 + 34984869-34985319,34986581-34987563
Length = 477
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 496 APXPPPKXXXPPPXPP 449
AP PPP+ PPP PP
Sbjct: 397 APPPPPQPPPPPPPPP 412
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 493 PXPPPKXXXPPPXPP 449
P PPPK PPP PP
Sbjct: 355 PPPPPKGPSPPPPPP 369
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 505 FXXAPXPPPKXXXPPPXPP 449
+ AP PPP PPP PP
Sbjct: 192 YRVAPPPPPPAAPPPPPPP 210
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 496 APXPPPKXXXPPPXPP 449
AP PPP PPP PP
Sbjct: 348 APPPPPPPPPPPPPPP 363
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 493 PXPPPKXXXPPPXPP 449
P PPP+ PPP PP
Sbjct: 17 PPPPPRRAPPPPSPP 31
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 493 PXPPPKXXXPPPXPP 449
P PPP+ PPP PP
Sbjct: 37 PPPPPRRRTPPPPPP 51
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 493 PXPPPKXXXPPPXPP 449
P PPP+ PPP PP
Sbjct: 55 PPPPPRTLPPPPPPP 69
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2
Query: 493 PXPPPKXXXPPPXPP 449
P PPP+ PPP PP
Sbjct: 133 PPPPPRSQAPPPPPP 147
>03_05_0576 + 25765137-25766420
Length = 427
Score = 28.3 bits (60), Expect = 8.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 496 APXPPPKXXXPPPXPP 449
+P PPP+ PPP PP
Sbjct: 76 SPSPPPQPSSPPPPPP 91
>02_05_0405 +
28708077-28708391,28708478-28708573,28709030-28709450,
28710051-28710141,28710483-28710819,28710905-28711053,
28711782-28712295
Length = 640
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 505 FXXAPXPPPKXXXPPPXPP 449
F P PPP PPP PP
Sbjct: 40 FSAPPTPPPAAQPPPPTPP 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,781,140
Number of Sequences: 37544
Number of extensions: 192659
Number of successful extensions: 2386
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1745
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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