Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B18
(946 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 46 6e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 2e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.019
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.025
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.31
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.31
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 2.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 2.9
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 2.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 5.1
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 6.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 46.4 bits (105), Expect = 6e-06
Identities = 23/52 (44%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -1
Query: 721 PPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPG--GXXXPPPPPPP 572
PPP P P PP P G P PPPPG G PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 726 PPPPPPXXXVGXPGGXGGGXGIXRXKAPXLGGXGXXPPPPG-AXXXPPPPPP 574
PPPPPP V P AP +GG PPPPG A PPPPPP
Sbjct: 732 PPPPPPAVIVPTP---APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.7 bits (71), Expect = 0.077
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 749 PXXXXXPXPXPXPXXGGXPPPXXXXXXAXXXPPXXP 856
P P P P P GG PPP A PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
P P P P P GG PPPPP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 744 PPPXXXPXXXPXPXXXXGXPPPRXXXXXXXXXPPPXXPP 860
P P P P P PPP PPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 0.95
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 773 PXPXPXXGGXPPPXXXXXXAXXXPPXXPXGGXXXXXPPXXXXAGXXPPXPP 925
P P P P P PP P G PP AG PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV---PPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 744 PPPXXXPXXXPXPXXXXGXPPPRXXXXXXXXXPPPXXPP 860
P P P P P G PPP PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 400 PPPPGGPXXKKXPXPXPQKKXXPPXXGXGGAPPTP 296
PPPP P P P P PP G PP P
Sbjct: 732 PPPP--PPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 746 PPXXXXXPXPXPXPXXGGXPPPXXXXXXAXXXPPXXPXGGXXXXXPPXXXXAGXXPPXPP 925
PP P P P P PPP PP PP AG PP PP
Sbjct: 735 PPPAVIVPTPAPAPIP--VPPPAPIMGGPPPPPP-----------PPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 400 PPPPGGPXXKKXPXPXPQKKXXPPXXGXGGAPPTP 296
PPPP P P P PP GG PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPV---PPPAPIMGGPPPPP 765
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 603 PPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGXG 716
PP G PP P G PPPP P G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect(2) = 0.045
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 646 PXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
P P P P P PPP P G P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 25.8 bits (54), Expect(2) = 0.045
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -1
Query: 427 PXRGXXXXXPPPPGGPXXKKXPXPXPQKKXXPPXXGXGGA 308
P G PPPPG P P P PP GG+
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPP-----PPAVSAGGS 790
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 672 PPPPXXGPXXXXGXGGGGXXXPXXPPP 752
PPPP P G G G P PPP
Sbjct: 761 PPPPPPPP----GVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDX---PPXGPXPXGGXPXPPPPGGXXXPPPPPP 575
PPPP P G G PP P P PP G PPPPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 32.7 bits (71), Expect = 0.077
Identities = 31/112 (27%), Positives = 31/112 (27%), Gaps = 5/112 (4%)
Frame = +3
Query: 603 PPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGXGG-----GGXXXPXXPPPXXXPX 767
PP G PP G G SL PPPP P G G P PPP P
Sbjct: 316 PPSRRNRGKPPIGNG-SSNSSLPPPPP---PPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 768 XXPXPXXXXGXPPPRXXXXXXXXXPPPXXPPGXXXXXXXXXXXXRXXXPPXP 923
P P PPP P R PP P
Sbjct: 372 TGRQP-----PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Score = 32.3 bits (70), Expect = 0.10
Identities = 31/121 (25%), Positives = 32/121 (26%), Gaps = 12/121 (9%)
Frame = +3
Query: 534 PPPPXGXRGXPXXGGGGGGG----XXXPPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXX 701
PPP RG P G G PP G P P G + PPPP P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP--LPPQGRSAPPPPPPRSAPST 372
Query: 702 XXG----XGGGGXXXPXXPPP----XXXPXXXPXPXXXXGXPPPRXXXXXXXXXPPPXXP 857
P PPP P P PP PP P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 858 P 860
P
Sbjct: 433 P 433
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPL 554
PP P G P P P G PP P PPP P P P+
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPV 488
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 6/66 (9%)
Frame = -1
Query: 751 GGGXXGXXXPPPPXPXXXXG------PXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXP 590
G G PPPP P P G PP G P P
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSN 387
Query: 589 PPPPPP 572
PP PPP
Sbjct: 388 PPAPPP 393
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
P P P PP P G PP PP P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 736 GXXXPPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPP 572
G PPPP P P G R PP P PPP P PP
Sbjct: 357 GRSAPPPPPPRS--APSTG----RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 797 PPXXXXXXGXGGXPXGGGXXRXXXPPPPXP 708
PP G P G G PPPP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.6 bits (56), Expect = 5.1
Identities = 28/119 (23%), Positives = 32/119 (26%), Gaps = 10/119 (8%)
Frame = -1
Query: 625 PXPPPPGGXXXPPP--PPPPXXGXPLXP--XXXXXXXXXXXXXXXXXXXXVXGXXXGXXX 458
P PPP G PP PP P + P
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 457 PPXXXKXKXXPXRG------XXXXXPPPPGGPXXKKXPXPXPQKKXXPPXXGXGGAPPT 299
PP + + P G PPPP P P PQ + PP AP T
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRSAPST 372
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPP 572
PP P P + PP P PP G PPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = -1
Query: 724 PPPPXPXXXXG--PXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLX 551
PPP P P G PP P P P PP P PP G P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPV-PTPPSLPPSAPP---SLPPSAPPSLPMGAPAA 446
Query: 550 P 548
P
Sbjct: 447 P 447
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -1
Query: 658 PPXGPX-PXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
PP P P P P PPP PPP G P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP 267
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +2
Query: 767 PXPXPXPXXGGXPPPXXXXXXAXXXPPXXPXGGXXXXXPPXXXXAGXXPPXPP 925
P P P G PP + PP P P PP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +2
Query: 671 PPPXPPGXPTXXXGGGGGGXXXXXXPPXXXXXPXPXPXPXXGGXPPP 811
PP PP P PP P P P PPP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -1
Query: 640 PXGGXPXPPPPGGXXXP--PPPPPP 572
P G P PPPP G P PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -1
Query: 640 PXGGXPXPPPPG--GXXXPPPPPPP 572
P P PPPPG PPPPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 613 PPGGXXXPPPPPPPXXGXPLXP 548
PPG PPPPPPP P P
Sbjct: 5 PPGNP--PPPPPPPGFEPPSQP 24
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPPP 581
PP P P P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPG 605
PP G P P PPPPG
Sbjct: 14 PPPGFEPPSQPPPPPPPG 31
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.019
Identities = 33/147 (22%), Positives = 33/147 (22%), Gaps = 3/147 (2%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXPX 545
PP P P G PP P P P P P G PP P G P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG----APPVPAPSGIPPVPK 1096
Query: 544 XXXXXXXXXXXXXXXXXXXVXGXXXGXXXPPXXXKXKXXPXRGXXXXXP---PPPGGPXX 374
P P P PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Query: 373 KKXPXPXPQKKXXPPXXGXGGAPPTPK 293
P P P P G PP PK
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Score = 33.1 bits (72), Expect = 0.059
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
PP P P P PP P P G P PPP PP P P G P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSG--IPPV-PKPAAGVPPVPPPS---EAPPVPKPSVGVPPVP 1211
Score = 31.9 bits (69), Expect = 0.14
Identities = 36/149 (24%), Positives = 36/149 (24%), Gaps = 6/149 (4%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXP------PXGPXPXGGXPXPPPPGGXXXPPPPPPPXXG 563
PP P P P G P P P P G P P P PP P G
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS----VAAPPVPAPSG 1157
Query: 562 XPLXPXXXXXXXXXXXXXXXXXXXXVXGXXXGXXXPPXXXKXKXXPXRGXXXXXPPPPGG 383
P P PP P G PPP
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV-PPPSTA 1216
Query: 382 PXXKKXPXPXPQKKXXPPXXGXGGAPPTP 296
P P P P P APP P
Sbjct: 1217 P-----PVPTPSAGLPPVPVPTAKAPPVP 1240
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 543 PXGXRGXPXXGGGGGGGXXXPPGGGGXGXPPXGXGPXG 656
P G G P GGG GG GG G G G GP G
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 549 GXRGXPXXGGGGGGGXXXPPGGGGXGXPPXGXGPXG 656
G G P GG GG PGG G G G GP G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 807 GGXPPXXGXGXGXGXXXXXGGXXXXXXPPPPPPXXXVGXPGGXGGGXGIXRXKAPXLGGX 628
GG PP G G G G P G PGG GGG G LGG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG---GFGGGLGGF 254
Query: 627 GXXP 616
G P
Sbjct: 255 GGGP 258
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = +3
Query: 540 PPXGXRGXPXXGGGGGGGXXXPPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGXGG 719
PP G G GG GG G GG G P G GG P G G G
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG-GGPGGFGGGLGGFGGGP 258
Query: 720 GG 725
GG
Sbjct: 259 GG 260
Score = 31.1 bits (67), Expect = 0.24
Identities = 23/63 (36%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Frame = +3
Query: 549 GXRGXPXXGGGGGGGXXXP-PGG----GGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGX 713
G G G GGG G P PGG GG G G GG P GP G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 714 GGG 722
GG
Sbjct: 244 PGG 246
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 543 PXGXRGXPXXGGGGG-GGXXXPPGGGGXGXPPXGXGPXG 656
P G G P G GGG GG PGG G G P G G G
Sbjct: 237 PGGFGGGPG-GFGGGLGGFGGGPGGFGGG--PGGHGGPG 272
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 4/73 (5%)
Frame = -1
Query: 940 PPPPPXGXGGXXX----RXXXXXXXXXXXXPGGXXGGGXXXXXXXXXRGGGXPXXXXGXG 773
PPP P G GG PGG GG GGG G G
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Query: 772 XXXGXXXGGGXXG 734
G G G G
Sbjct: 260 GFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 576 GGGGGGXXXPPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGXGGGG 725
GGG GG GGG G PP G G G G G GG
Sbjct: 187 GGGFGGF----GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +3
Query: 573 GGGGGGGXXXPPGGGGXGXPPXGXGPXGGXSLXPPPPXXGPXXXXGXG 716
G GGG G GG G P G GG P GP G G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 534 PPPPXGXRGXPXXGGGGGGGXXXPPGG-GGXG 626
PPPP G P GGG G P GG GG G
Sbjct: 99 PPPPRGPLFGPRIGGGHHGPLHGPHGGFGGRG 130
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXP 557
P P P PPPP PPP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 721 PPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPPXXGXPLXP 548
PP P P P P P PP P G PPPP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA---PPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = -1
Query: 736 GXXXPPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPPP 572
G P P P P P P P P P PP PPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 3/46 (6%)
Frame = -1
Query: 676 GGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPP---PPXXGXPLXP 548
GG P P PP PPPPP PP P P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPPPPPP 572
PP P P P PPPPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -2
Query: 726 PPPPPPXXXVGXPGGXGGGXGIXRXKAPXLGGXGXXPPPPGAXXXPPPPP 577
PPPPPP + + LG PPPP PP PP
Sbjct: 239 PPPPPP--TLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = -1
Query: 721 PPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPP 575
PPP P P P G PPP PP PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.31
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = -1
Query: 724 PPPPXPXXXXGPXXGGGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPP--PPPPXXGXPLX 551
P PP P P PP P P PP PPP P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 550 P 548
P
Sbjct: 188 P 188
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 549 GXRGXPXXGGGGGGGXXXPPGGGGXGXPPXGXGPXGGXSLXPPPP 683
G G GGG GG GGGG G P G S PP
Sbjct: 157 GGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGGSRPSQPP 201
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 537 PPPXGXRGXPXXGGGGGGGXXXPPGG 614
PPP G G P G G GG PGG
Sbjct: 76 PPPPGAEGGP--GAGFGGFPGAGPGG 99
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 607 GGXXXPPPPPPP 572
GG PPPPPPP
Sbjct: 303 GGLPPPPPPPPP 314
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 658 PPXGPXPXGGXPXPPPPGGXXXPPP 584
P G GG P PPPP PPP
Sbjct: 295 PSSGDSANGGLPPPPPP-----PPP 314
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 649 GPXPXGGXPXPPPPGGXXXPPPPP 578
GP G PPPP G PPP
Sbjct: 119 GPVRGVGYTAPPPPAGFGRGAPPP 142
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
Frame = -2
Query: 726 PPPPPPXXXVGXPGGXG----GGXGIXRXKAPX-----LGGXGXXPPPPGAXXXPPPPPP 574
PPP P G G G GI +AP + G G PPP A PPP
Sbjct: 83 PPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPP 142
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = -2
Query: 723 PPPPPXXXVGXPGGXGGGXGIXRXKAPXLGGXGXXP--PPPGAXXXPPPPPPL 571
PPPPP V A G P PPP PPPPPPL
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPP-----PPPPPPL 954
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 549 GXRGXPXXGGGGGGGXXXPPGGGGXGXPPXG 641
G G P G GGG G P GGG G P G
Sbjct: 75 GLNGQPG-GPGGGPGEGFP--GGGFGFDPFG 102
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 679 GGGXRDXPPXGPXPXGGXPXPPPPGGXXXPPPPPP 575
G G + P P P P P PPPPP
Sbjct: 714 GTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPP 748
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -1
Query: 655 PXGPXPXGGXPXPPPPGGXXXPPPPPPP 572
P P G PPPP PP PP
Sbjct: 36 PQWECPVRGLTIPPPPSVDHSAPPSGPP 63
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.153 0.549
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,069,415
Number of Sequences: 5004
Number of extensions: 41358
Number of successful extensions: 531
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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