BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B17
(890 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 96 1e-21
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 96 1e-21
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 94 4e-21
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 94 4e-21
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 58 4e-10
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 53 1e-08
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 52 2e-08
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 50 1e-07
AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9... 50 1e-07
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 50 1e-07
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 50 1e-07
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 47 7e-07
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 46 2e-06
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 34 0.005
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 96.3 bits (229), Expect = 1e-21
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Frame = +2
Query: 134 EFKTTPVDAAFVEKQKKXLSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 310
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 311 MMMYKVG-FLPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFL 487
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+GMF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 488 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNMEVKNKMDYVKMMD 622
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ D
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYD 186
Score = 58.0 bits (134), Expect = 4e-10
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 697 TIPIPWTYPNN---EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFF 867
T P Y NN E+ + Y TED+GLNAYYYYF F K+G K RRG Y++
Sbjct: 205 TATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWY 264
Query: 868 FYQ 876
+Q
Sbjct: 265 MHQ 267
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 96.3 bits (229), Expect = 1e-21
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Frame = +2
Query: 134 EFKTTPVDAAFVEKQKKXLSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 310
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 311 MMMYKVG-FLPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFL 487
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+GMF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 488 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNMEVKNKMDYVKMMD 622
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+ D
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKLYD 186
Score = 58.8 bits (136), Expect = 2e-10
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 697 TIPIPWTYPNN---EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFF 867
T P Y NN E+ + Y TED+GLNAYYYYF F K+G K RRG Y++
Sbjct: 205 TATYPMDYYNNFYTEEYLNYYTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWY 264
Query: 868 FYQ 876
+Q
Sbjct: 265 MHQ 267
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 94.3 bits (224), Expect = 4e-21
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Frame = +2
Query: 134 EFKTTPVDAAFVEKQKKXLSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 310
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 311 MMMYKVG-FLPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFL 487
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+GMF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 488 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNMEVKNKMDYVKM 616
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL 184
Score = 58.0 bits (134), Expect = 4e-10
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 697 TIPIPWTYPNN---EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFF 867
T P Y NN E+ + Y TED+GLNAYYYYF F K+G K RRG Y++
Sbjct: 205 TATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWY 264
Query: 868 FYQ 876
+Q
Sbjct: 265 MHQ 267
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 94.3 bits (224), Expect = 4e-21
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Frame = +2
Query: 134 EFKTTPVDAAFVEKQKKXLSLFYNVN-EINYEAEYYKVAQDFNIEASKDCYTNMKAYENF 310
+F+ D F+ KQK + N++ + Y+ EY + + + +K Y + F
Sbjct: 25 KFEAKYADKEFLFKQKFFFEVLRNIHLPLKYD-EYIPYTKTWVSDETK--YNDFAQVAEF 81
Query: 311 MMMYKVG-FLPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFL 487
YK G FL K FSI+ E+ + A+F Y + D++ +YK +AR +N+GMF+
Sbjct: 82 FDYYKTGAFLEKGELFSIYNEQYLRQTYAVFTFLYNSADWDTYYKNMIWARDNINEGMFI 141
Query: 488 YAYYIAIIQRSDTANFVLPAPYEAYPQYFVNMEVKNKMDYVKM 616
Y ++ ++ R D VLPA YE YP YF N +V ++Y K+
Sbjct: 142 YVLHLTVMHRPDLQGIVLPAIYEIYPYYFFNTDVIRTINYKKL 184
Score = 58.0 bits (134), Expect = 4e-10
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 697 TIPIPWTYPNN---EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFF 867
T P Y NN E+ + Y TED+GLNAYYYYF F K+G K RRG Y++
Sbjct: 205 TATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWY 264
Query: 868 FYQ 876
+Q
Sbjct: 265 MHQ 267
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 58.0 bits (134), Expect = 4e-10
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 218 NYEAEYYK-VAQDFNIEASKDCYTNMKAYENFMMMYKVGF-LPKNLEFSIFYEKMREEAI 391
NY + YK + Q S + T + + + LP+ +FS+F K R+ A
Sbjct: 34 NYLTDRYKPIGQSLQTRFSSEADTRIAVRATTLPDIRFAEELPRRGDFSLFIPKHRKIAG 93
Query: 392 ALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTANFVLPAPYEAYPQY 571
L KLF D + + YAR +N ++ YA +AI R DT N +P+ ++ +P
Sbjct: 94 DLIKLFLDQPDVDTLMSVSSYARDRLNPVLYQYAMAVAIQHRPDTKNLNIPSFFDLFPDS 153
Query: 572 FVNMEVKNKM 601
FV+ V K+
Sbjct: 154 FVDPTVIPKL 163
Score = 36.3 bits (80), Expect = 0.001
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 727 NEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFYQXXVS 888
+E R+AY ED+G+N +++ H HL + K RRG +++ +Q ++
Sbjct: 192 DEQRLAYFREDIGVNLHHW--HWHLVYPGEGPNNVVNKDRRGELFYYMHQQLIA 243
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 53.2 bits (122), Expect = 1e-08
Identities = 31/89 (34%), Positives = 45/89 (50%)
Frame = +2
Query: 335 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 514
+P+ FS+F K R+ A L LF D E A Y+R +N +F YA +AI
Sbjct: 75 VPRRGGFSLFNPKHRQIAGDLINLFMNQPDVETLMSVAAYSRDRLNPILFQYALSVAIQH 134
Query: 515 RSDTANFVLPAPYEAYPQYFVNMEVKNKM 601
R DT + +P+ E +P FV+ V K+
Sbjct: 135 RPDTKDLNIPSFLELFPDSFVDPSVFPKL 163
Score = 39.1 bits (87), Expect = 2e-04
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 691 TPTIPIPWTYPNNED--RIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYF 864
T IP+ +T + ED R+AY ED+G+N +++ H HL + K RRG ++
Sbjct: 177 TIDIPMNYTASDREDEQRLAYFREDIGVNLHHW--HWHLVYPGEGPDRVVNKDRRGELFY 234
Query: 865 FFYQXXVS 888
+ +Q ++
Sbjct: 235 YMHQQLIA 242
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 52.0 bits (119), Expect = 2e-08
Identities = 28/83 (33%), Positives = 41/83 (49%)
Frame = +2
Query: 353 FSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTAN 532
FS+F K R+ A AL LF DF A Y R +N +F Y+ +A+ R DT +
Sbjct: 81 FSLFAPKHRDAAGALINLFLQQPDFATLMSVATYCRDRLNPVLFQYSLAVAVQHREDTKD 140
Query: 533 FVLPAPYEAYPQYFVNMEVKNKM 601
+P+ +P FV+ V K+
Sbjct: 141 VNIPSIVSLFPDQFVDPAVFPKL 163
Score = 36.3 bits (80), Expect = 0.001
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 700 IPIPWTYPNNED--RIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFY 873
IP +T + ED R+AY ED+G+N +++ H HL + + K RRG +F+ +
Sbjct: 180 IPPNYTASDREDEQRMAYFREDIGVNMHHW--HWHLVYPGDGPDEVVRKDRRGELFFYMH 237
Query: 874 QXXVS 888
++
Sbjct: 238 SQLIA 242
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 49.6 bits (113), Expect = 1e-07
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +2
Query: 335 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 514
L + +FS+F + R+ A L +F ++ E A +AR +N +F YA +A++
Sbjct: 74 LGRQEQFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLH 133
Query: 515 RSDTANFVLPAPYEAYPQYFVNMEV 589
R DT + LP E +P +V+ +V
Sbjct: 134 RKDTHDLDLPTIIEVFPDKYVDSKV 158
Score = 37.1 bits (82), Expect = 7e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 724 NNEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFYQXXVS 888
+ E R+ Y ED+G+N +++++H PF S + K RRG +++ +Q V+
Sbjct: 189 DEEHRLWYFREDIGVNLHHWHWHLVYPF-DASNRAIVDKDRRGELFYYMHQQLVA 242
>AJ459962-1|CAD31061.1| 685|Anopheles gambiae prophenoloxidase 9
protein.
Length = 685
Score = 49.6 bits (113), Expect = 1e-07
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +2
Query: 335 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 514
+P++ EF++F R+ A L D + A YAR +N +F YA +A++
Sbjct: 76 VPRHGEFNLFNPAQRQVAGRLVGDLLSQPDPQAMLSVAAYARDRLNPTLFQYALAVALVH 135
Query: 515 RSDTANFVLPAPYEAYPQYFVN 580
R DT N +P+ E +P FV+
Sbjct: 136 RKDTGNVPVPSFLEMFPTRFVD 157
Score = 33.9 bits (74), Expect = 0.007
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 730 EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFYQXXVS 888
E R+AY ED+G+N +++ H HL + K RRG +++ ++ V+
Sbjct: 193 EQRLAYFREDIGVNLHHW--HWHLVYPQEGPLEVVDKDRRGELFYYMHRQTVA 243
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 49.6 bits (113), Expect = 1e-07
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +2
Query: 335 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 514
+P+ FS+F + R A L KLF D + A YAR +N +F YA A++
Sbjct: 89 VPRRGAFSLFIPEHRVIAGRLIKLFLDQPDADTLGDVAAYARDRLNGPLFQYALASALLH 148
Query: 515 RSDTANFVLPAPYEAYPQYFVN 580
RSDT++ +P+ +P F++
Sbjct: 149 RSDTSDVPVPSFLHLFPDQFID 170
Score = 37.1 bits (82), Expect = 7e-04
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 700 IPIPWTYPNN--EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFY 873
IP+ +T + E R+AY ED+G+N +++ H HL + + K RRG +++ +
Sbjct: 194 IPLNYTASDRVTEQRLAYFREDIGVNLHHW--HWHLVYPAEGPERVVRKDRRGELFYYMH 251
Query: 874 QXXVS 888
Q ++
Sbjct: 252 QQMIA 256
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 49.6 bits (113), Expect = 1e-07
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +2
Query: 335 LPKNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 514
L + +FS+F + R+ A L +F ++ E A +AR +N +F YA +A++
Sbjct: 74 LGRQEQFSLFIPRHRKIAARLIDIFMGMRNVEDLQSCAVFARDRINPYLFNYALSVALLH 133
Query: 515 RSDTANFVLPAPYEAYPQYFVNMEV 589
R DT + LP E +P +V+ +V
Sbjct: 134 RKDTHDLDLPTIIEVFPDKYVDSKV 158
Score = 37.1 bits (82), Expect = 7e-04
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +1
Query: 724 NNEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFYQXXVS 888
+ E R+ Y ED+G+N +++++H PF S + K RRG +++ +Q V+
Sbjct: 189 DEEHRLWYFREDIGVNLHHWHWHLVYPF-DASNRAIVDKDRRGELFYYMHQQLVA 242
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 47.2 bits (107), Expect = 7e-07
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +2
Query: 353 FSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTAN 532
FS+F + R+ A L KLF + + A YAR +N +F YA +A++ R DT +
Sbjct: 96 FSLFNPEHRKAAGKLTKLFLDQPNADRLVDVAAYARDRLNAPLFQYALSVALLHRPDTKS 155
Query: 533 FVLPAPYEAYPQYFVNMEVKNKM 601
+P+ +P F++ + +M
Sbjct: 156 VSVPSLLHLFPDQFIDPAAQVRM 178
Score = 35.9 bits (79), Expect = 0.002
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 700 IPIPWTYPNN----EDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAF-KXRRGXXYF 864
IPIP Y E R+A+ ED+G+N +++++H P SG K RRG ++
Sbjct: 193 IPIPMNYTATDAEPEQRMAFFREDIGVNLHHWHWHLVYP---ASGPPDVVRKDRRGELFY 249
Query: 865 FFYQ 876
+ +Q
Sbjct: 250 YMHQ 253
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 46.0 bits (104), Expect = 2e-06
Identities = 28/79 (35%), Positives = 38/79 (48%)
Frame = +2
Query: 353 FSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTAN 532
FS+F R A L +LF + A Y R +N MF YA IA+I R DT +
Sbjct: 82 FSVFNAAHRRAAGQLIQLFLDQPNPTTLGAVAAYVRDRVNAPMFQYALAIALIHRDDTRD 141
Query: 533 FVLPAPYEAYPQYFVNMEV 589
+P+ E +P FV+ V
Sbjct: 142 VEIPSFLELFPDRFVDPAV 160
Score = 32.7 bits (71), Expect = 0.015
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 727 NEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFYQXXVS 888
+E R+AY ED+GL+ +++ H HL + K RRG ++ +Q ++
Sbjct: 192 DEQRVAYWREDIGLSLHHW--HWHLVYPATGPDRVVRKDRRGELFYHMHQQTIA 243
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.005
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 700 IPIPWTYPN--NEDRIAYLTEDVGLNAYYYYFHSHLPFWWNSGKYGAFKXRRGXXYFFFY 873
IP+ +T + +E R+AY ED+G+N +++ H HL + K RRG +++ +
Sbjct: 181 IPMNFTASDRVDEQRLAYWREDIGVNLHHW--HWHLVYPARGPNRIVRKDRRGELFYYMH 238
Query: 874 Q 876
Q
Sbjct: 239 Q 239
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,765
Number of Sequences: 2352
Number of extensions: 15821
Number of successful extensions: 49
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -