Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B16
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    34   0.16 
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    34   0.16 
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl...    30   1.9  
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical ...    29   5.8  
AL023835-6|CAA19483.1|  144|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical protein
            Y70C5C.1 protein.
          Length = 985

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 277  DEMPVRQNNMVVATKDNLKMKQMM-DDVEMMIREGILTGKIERRDGTVISLKKSEDIENL 453
            DE+  RQ N     +D   +K +  +DV  +  + I  G  ERR   VI   KSED   +
Sbjct: 876  DEIECRQYNFTRIEEDVELLKTIKKEDVIALFDKKIRKGAAERRKLAVIVHGKSEDRAAV 935

Query: 454  ARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQ 549
              ++   LE      +V++L  L + +  YGQ
Sbjct: 936  NEIIKKHLEDGKKKKEVLYLDQLRQFLPLYGQ 967


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
            protein Y70C5C.1 protein.
          Length = 985

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 277  DEMPVRQNNMVVATKDNLKMKQMM-DDVEMMIREGILTGKIERRDGTVISLKKSEDIENL 453
            DE+  RQ N     +D   +K +  +DV  +  + I  G  ERR   VI   KSED   +
Sbjct: 876  DEIECRQYNFTRIEEDVELLKTIKKEDVIALFDKKIRKGAAERRKLAVIVHGKSEDRAAV 935

Query: 454  ARLVLGGLEIVGDDAKVIHLTNLMKKMLSYGQ 549
              ++   LE      +V++L  L + +  YGQ
Sbjct: 936  NEIIKKHLEDGKKKKEVLYLDQLRQFLPLYGQ 967


>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical protein
            T06E4.1 protein.
          Length = 1295

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 685  FREHVLENGEDVANSXHDHPEDRIAETGSVHVPRKSARRCTC 560
            F+E    + + + +S   HP+D + ET +V  P K A R  C
Sbjct: 1251 FQEEFSHSPDAITSSTVLHPDDHLQETTAVETPSKKANRSNC 1292


>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
           protein 17 protein.
          Length = 1146

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +1

Query: 571 YVPTSLGHVH-YLSPRSCLLDD 633
           ++ TS+ H H YLS RSCL+DD
Sbjct: 717 FIHTSMLHFHGYLSSRSCLIDD 738


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical protein
            C02G6.1 protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +1

Query: 280  EMPVRQNNMVVATKDNLKMKQM-MDDVEMMIREGILTGKIERRDGTVISLKKSEDIENLA 456
            ++  RQ +     K+   +K +  DDV  +  + I    +ERR   V+   K +D E L 
Sbjct: 866  QIECRQYDFARREKEVKVLKSIGKDDVIALFDKKIRKNAVERRKLVVLVHGKIDDQETLN 925

Query: 457  RLVLGGLEIVGDDAKVIHLTNLMKKMLSY 543
            R++   +E    + ++++L  L + +  Y
Sbjct: 926  RIIKKNVESGKKEKEILNLDQLRQSLPVY 954


>AC006655-6|AAF39878.2|  383|Caenorhabditis elegans Hypothetical
           protein H10D18.6 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 475 LEIVGDDAKVIHLTNLMKKMLSYGQYNMDKYTY 573
           +E VG    + H+T    KM S+ +YN D Y Y
Sbjct: 301 VEFVGKYGPLHHMTPYSLKMSSFQRYNYDIYVY 333


>AL023835-6|CAA19483.1|  144|Caenorhabditis elegans Hypothetical
           protein Y37A1B.6 protein.
          Length = 144

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
 Frame = +1

Query: 505 IHLTNLM----KKMLSYGQYNMDKYTYVPTSLGHVHYLSPRSCLLDDHXTSLQHLHRFQE 672
           IH T LM    ++ +  G Y++D+ +  P +L + H ++ +         SLQH H++  
Sbjct: 42  IHNTFLMVASFEQFVLEGYYSIDRASNFPENL-YFHSVTGKIVHKPHSLVSLQHTHKYMA 100

Query: 673 HAP 681
            AP
Sbjct: 101 QAP 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,299,956
Number of Sequences: 27780
Number of extensions: 366407
Number of successful extensions: 915
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)