Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B14
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0088 - 627825-628984,629339-629509,629612-630416                 36   0.031
11_04_0305 - 16162063-16162096,16162282-16164365,16165283-161653...    30   2.0  
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336...    29   3.5  
09_04_0246 - 16024454-16024529,16024635-16024720,16024805-160248...    28   8.1  

>02_01_0088 - 627825-628984,629339-629509,629612-630416
          Length = 711

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = -2

Query: 642 KSSINTDKGTTVDI*A*GWRCRSSPEFFSLSLCCSKLNVAACGSTNFINGH 490
           K S NTD GT+ D    GW   S+  FF+LS   +KL V  C +  F+ G+
Sbjct: 70  KCSNNTD-GTSTD----GWVSTSTAPFFTLSSRANKLTVVGCNTLAFLGGY 115


>11_04_0305 - 16162063-16162096,16162282-16164365,16165283-16165351,
            16168317-16169288,16169548-16169650,16170427-16170509
          Length = 1114

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 120  RIKDTDTNFIPKRELFLSVPDLRISNLKGFPI 25
            +++  D  F PK E+  +VP+LRI  LK + I
Sbjct: 1015 KLRKLDIMFCPKMEVLENVPELRILTLKDYSI 1046


>02_01_0471 -
           3364215-3364912,3365511-3365742,3365827-3366198,
           3366324-3366449,3367056-3367262,3367399-3367492,
           3367575-3367621,3367705-3368157,3368261-3368560,
           3368656-3369114,3369189-3369410,3369659-3369890,
           3370051-3370422,3371210-3371322,3371682-3371903,
           3371977-3372180,3372308-3372572,3373123-3373311,
           3373441-3373768,3373843-3374248,3374339-3374648,
           3375677-3375837,3376825-3376998,3377265-3377609,
           3377713-3377754,3378585-3378734,3378847-3379002,
           3379088-3379540,3379651-3379966,3380402-3380839,
           3381475-3381697,3383538-3383852,3384033-3384095,
           3384699-3384903,3385362-3385425,3386014-3386204
          Length = 3048

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 578 RHLHPYAHISTVVPLSVLIDDLNLPSSKIPGELYPYL 688
           +H     H  ++  L VL+D L LPSSK+    Y ++
Sbjct: 313 QHARAQNHFRSIGGLEVLLDGLGLPSSKLSVSKYSFV 349


>09_04_0246 -
           16024454-16024529,16024635-16024720,16024805-16024894,
           16025349-16025435,16026112-16026229,16026852-16026982,
           16027619-16027909,16028000-16028124,16028209-16028334,
           16028452-16028487,16028599-16028902
          Length = 489

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 420 LSCWMIANCINHLMKFGKHIRYIHG 494
           L  +++  C+ H  +FGK +R +HG
Sbjct: 322 LPSFIVLKCLQHFKEFGKVVRPLHG 346


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,130,704
Number of Sequences: 37544
Number of extensions: 458671
Number of successful extensions: 1069
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)