Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B14
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025305-1|AAH25305.1|  538|Homo sapiens CLPTM1-like protein.          77   1e-13
AK027306-1|BAB55030.1|  538|Homo sapiens protein ( Homo sapiens ...    77   1e-13
AB045223-1|BAB20083.1|  512|Homo sapiens cisplatin resistance re...    59   2e-08

>BC025305-1|AAH25305.1|  538|Homo sapiens CLPTM1-like protein.
          Length = 538

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
 Frame = +2

Query: 104 SVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLVFYASLKQQPL 283
           S + ++  +FVVYV++T W +  I     C     C   YL   P   L  Y + +    
Sbjct: 7   SFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLG 66

Query: 284 EEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVVMLDDSKLYKSFDE 463
            E    N++  V  + +FD  +     V +++P+KTRNNGTLY ++ +     L   + +
Sbjct: 67  AE----NNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVL--PWHD 120

Query: 464 IRQTHPLHTWPLIKFVEPQAATFNLLQ-HNDKEKNSGEDRHL----HPYAHISTVVPLSV 628
            +Q H +   PL  ++ P+    NLL   +D ++   E +       P +H    + L+V
Sbjct: 121 GKQVHLVS--PLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNV 178

Query: 629 LIDDLNLPSSKIPGELYPYLRI 694
           + D+     S +P +++ Y+++
Sbjct: 179 MADNFVFDGSSLPADVHRYMKM 200


>AK027306-1|BAB55030.1|  538|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14400 fis, clone HEMBA1003742, weakly similar to
           Homo sapiens cleft lip and palate transmembrane protein
           1 ).
          Length = 538

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
 Frame = +2

Query: 104 SVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDKCFSSYLTSNPVQNLVFYASLKQQPL 283
           S + ++  +FVVYV++T W +  I     C     C   YL   P   L  Y + +    
Sbjct: 7   SFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSHLG 66

Query: 284 EEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVVMLDDSKLYKSFDE 463
            E    N++  V  + +FD  +     V +++P+KTRNNGTLY ++ +     L   + +
Sbjct: 67  AE----NNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGVL--PWHD 120

Query: 464 IRQTHPLHTWPLIKFVEPQAATFNLLQ-HNDKEKNSGEDRHL----HPYAHISTVVPLSV 628
            +Q H +   PL  ++ P+    NLL   +D ++   E +       P +H    + L+V
Sbjct: 121 GKQVHLVS--PLTTYMVPKPEEINLLTGESDTQQIEAEKKPTSALDEPVSHWRPRLALNV 178

Query: 629 LIDDLNLPSSKIPGELYPYLRI 694
           + D+     S +P +++ Y+++
Sbjct: 179 MADNFVFDGSSLPADVHRYMKM 200


>AB045223-1|BAB20083.1|  512|Homo sapiens cisplatin resistance
           related protein CRR9p protein.
          Length = 512

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 5/173 (2%)
 Frame = +2

Query: 191 CRRGDKCFSSYLTSNPVQNLVFYASLKQQPLEEGTSSNSVTKVHTLLNFDYRNPASINVQ 370
           C     C   YL   P   L  Y + +     E    N++  V  + +FD  +     V 
Sbjct: 10  CSGDANCIQPYLARRPKLQLSVYTTTRSHLGAE----NNIDLVLNVEDFDVESKFERTVN 65

Query: 371 LNIPRKTRNNGTLYMHVVMLDDSKLYKSFDEIRQTHPLHTWPLIKFVEPQAATFNLLQ-H 547
           +++P+KTRNNGTLY ++ +     L   + + +Q H +   PL  ++ P+    NLL   
Sbjct: 66  VSVPKKTRNNGTLYAYIFLHHAGVL--PWHDGKQVHLVS--PLTTYMVPKPEEINLLTGE 121

Query: 548 NDKEKNSGEDRHL----HPYAHISTVVPLSVLIDDLNLPSSKIPGELYPYLRI 694
           +D ++   E +       P +H    + L+V+ D+     S +P +++ Y+++
Sbjct: 122 SDTQQIEAEKKPTSALDEPVSHWRPRLALNVMADNFVFDGSSLPADVHRYMKM 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,809,625
Number of Sequences: 237096
Number of extensions: 2695092
Number of successful extensions: 4677
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4675
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)