Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B14
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical pr...    58   6e-09
Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical p...    29   5.5  
Z78542-5|CAB01748.1|  915|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w...    28   7.3  
U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z66524-5|CAC70104.1|  566|Caenorhabditis elegans Hypothetical
           protein T13H5.8 protein.
          Length = 566

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
 Frame = +2

Query: 101 VSVSLILTLIFVVYVINTIWTLAEIFIPPECRRGDK---CFSSYLTSN-----PVQNLVF 256
           ++++ I++ +F+ ++    + L ++F P  C   D    C+S  +  N      +  L  
Sbjct: 3   INLTKIVSTLFLSFMFYNFFQLYKLFTPELCTDQDSDELCYSPIVQPNHEGLYDLLQLRV 62

Query: 257 YASLKQQPLEEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVVMLDD 436
           Y S K+  LE        T + T+ N    +    ++Q+ IP     +G LY H ++L  
Sbjct: 63  YFSTKRDALE--------TLITTVENLQVADAFQKDLQVKIPSSVAKDGYLYAHTILLPH 114

Query: 437 SKLYKSFDEIRQTHPLHTW-PLIKFVEPQAATFNLLQHND-KEK-----NSGEDRHLHPY 595
              +   + ++ +  +H   P++ F EP A TF LL   + KEK        + + +   
Sbjct: 115 K--FDGRNPMQASWKVHVAAPMVVFQEPVAKTFQLLGDEEVKEKVDEKPKKSKSKVVELA 172

Query: 596 AHISTVVPLSVLIDDLNLPSSKIPGELYPYLRIR 697
           AH  T++P+ ++ +      +K+ GEL  +L I+
Sbjct: 173 AHFRTILPVRIVSEPNRYVKTKVSGELADFLTIQ 206


>Z92825-7|CAB07317.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -1

Query: 643 QIIN*YRQGYNCGYMSIRMEMSVFPRIFFFIIML**VKCGCLWFYKLYQWP 491
           +II     G++C  +++RM ++  PR   F  ++    CGCL  + + Q+P
Sbjct: 331 EIIRVCTVGFSCSVITLRMFLNQ-PRTGLFDSIIVYTLCGCLGAFSIPQFP 380


>Z81041-15|CAB02792.1|  487|Caenorhabditis elegans Hypothetical
           protein C27A7.6 protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = -1

Query: 643 QIIN*YRQGYNCGYMSIRMEMSVFPRIFFFIIML**VKCGCLWFYKLYQWP 491
           +II     G++C  +++RM ++  PR   F  ++    CGCL  + + Q+P
Sbjct: 331 EIIRVCTVGFSCSVITLRMFLNQ-PRTGLFDSIIVYTLCGCLGAFSIPQFP 380


>Z78542-5|CAB01748.1|  915|Caenorhabditis elegans Hypothetical
           protein F20D1.6 protein.
          Length = 915

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 24/90 (26%), Positives = 45/90 (50%)
 Frame = +2

Query: 245 NLVFYASLKQQPLEEGTSSNSVTKVHTLLNFDYRNPASINVQLNIPRKTRNNGTLYMHVV 424
           N++  AS+ +  L +    N+V K+ TL  F+Y+NP S N  L   +  + +   +   +
Sbjct: 414 NMLNAASMSENQLSDDELVNNV-KLDTL--FNYKNPKSANTFLAPYKCAKKSTVTWRLAI 470

Query: 425 MLDDSKLYKSFDEIRQTHPLHTWPLIKFVE 514
            L +++++ S D+ R    L    L+K  E
Sbjct: 471 ALANARVFMS-DQPRAEPQLWVEFLLKLRE 499


>U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w)
           trna synthetaseprotein 2, isoform a protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +2

Query: 497 LIKFVEPQAATFNLLQHNDKEKNSGEDRHLHPYAHISTVVPLSVLIDDLNLPSSKIPGEL 676
           L  F+E +    N L+   KE N G DR+L   +        S+ +++ N PS+   G L
Sbjct: 215 LYSFLEQEKFN-NKLKKEKKENNGGSDRNLDENSLFHPTFQCSICLENKN-PSALFCGHL 272

Query: 677 Y 679
           +
Sbjct: 273 F 273


>U39996-6|AAA81092.1|  595|Caenorhabditis elegans Hypothetical
           protein C56E6.5 protein.
          Length = 595

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 79  FSFRNEICISIFNSYI-NIRCVCNQYNMDIS*NIHTARMPPW 201
           F++ N +   + +S I N  C    Y   +S N+H+   PPW
Sbjct: 511 FNYSNFLLSKLLSSSIDNEECTFPSYMCKLSMNLHSDLYPPW 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,905,401
Number of Sequences: 27780
Number of extensions: 441738
Number of successful extensions: 1082
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)