Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B13
(848 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 238 1e-61
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 210 3e-53
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 204 2e-51
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 182 1e-44
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 164 2e-39
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 150 5e-35
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 137 4e-31
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 128 1e-28
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 121 2e-26
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 112 1e-23
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 110 5e-23
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 100 9e-20
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 93 1e-17
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 87 4e-16
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 55 5e-16
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 68 3e-10
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 64 3e-09
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 64 4e-09
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 62 2e-08
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 55 2e-06
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 55 3e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 1e-05
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 53 1e-05
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 53 1e-05
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 52 2e-05
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 52 2e-05
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 51 4e-05
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 49 1e-04
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 49 1e-04
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 49 2e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 4e-04
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 40 0.079
UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3; Methanomicrob... 35 3.0
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 9.1
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 238 bits (582), Expect = 1e-61
Identities = 121/196 (61%), Positives = 129/196 (65%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
SLKLQ RLAASV+RCGKK VWL PN IN ANTNS Q IRK K GL+IKKPV VHSR R
Sbjct: 3 SLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYR 62
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
VRKNTEARRKGRHCGFGK GTANARMP K LW +KKIDRHLYH
Sbjct: 63 VRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHD 122
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXX 635
LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 123 LYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQ 182
Query: 636 XLLQTFAREDEAALTA 683
L+ A+EDE A A
Sbjct: 183 ELIALHAKEDEIAAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 210 bits (513), Expect = 3e-53
Identities = 99/155 (63%), Positives = 114/155 (73%)
Frame = +3
Query: 99 LKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARV 278
L+LQ RLA+SV+RCGKK VWL PN N AN NS Q IRK K GL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 279 RKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 458
RKNT ARRKGRH G GK GTANARMP+K W +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 459 YMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
Y+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 204 bits (499), Expect = 2e-51
Identities = 96/150 (64%), Positives = 110/150 (73%)
Frame = +3
Query: 114 RLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKNTE 293
RLA+SV+RCGKK VWL PN N AN NS Q IRK K GL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 294 ARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAK 473
ARRKGRH G GK GTANARMP+K W +KKIDRH+YHSLY+K K
Sbjct: 61 ARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVK 120
Query: 474 GNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
GNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 121 GNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 182 bits (443), Expect = 1e-44
Identities = 87/156 (55%), Positives = 104/156 (66%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
+L+ Q RLA++V CGKK +WL PN N NS + IRK K L+I+KPV VHSR+R
Sbjct: 3 NLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSRSR 62
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
RKN ARRKGRH G GK GTA+ARMPQK LW A KID+HLYH
Sbjct: 63 CRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHL 122
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 123 LYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 164 bits (399), Expect = 2e-39
Identities = 79/156 (50%), Positives = 100/156 (64%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
SLKLQ RLA+S++ CG+ VWL PN N NS + +RK K G +I+KPV VHSRAR
Sbjct: 23 SLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRAR 82
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
RK EA+ GRH G G+ G+ ARMP KELW KKIDRH+Y
Sbjct: 83 WRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRD 142
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
LYM+AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 143 LYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 150 bits (363), Expect = 5e-35
Identities = 78/155 (50%), Positives = 96/155 (61%)
Frame = +3
Query: 99 LKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARV 278
L LQ RLA+SV+ CGKK V L PN N AN NS Q IRK + GL+I KPV VHS+A
Sbjct: 4 LSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQAHC 63
Query: 279 RKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 458
KNT KGRH GK GTAN +P++ W +KKID H+ HSL
Sbjct: 64 EKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSL 120
Query: 459 YMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
Y++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 121 YLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 137 bits (331), Expect = 4e-31
Identities = 75/176 (42%), Positives = 94/176 (53%), Gaps = 20/176 (11%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPV------- 254
SLKLQ RLAAS++ CG + +W+ PN + T+ R + G
Sbjct: 3 SLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFPT 62
Query: 255 -------------AVHSRARVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXX 395
+HSRAR + A+R GRH G+GK GT AR+P K LW
Sbjct: 63 LRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVL 122
Query: 396 XXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
AKKID+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 123 RRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 128 bits (310), Expect = 1e-28
Identities = 59/156 (37%), Positives = 89/156 (57%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
S+K+ +A+ ++ CGK+ +W+ PN T+S IRK + G ++KK HSR R
Sbjct: 3 SVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNR 62
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
+R E + GRH G GK G+ N+R K +W + K++RHLY S
Sbjct: 63 IRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRS 122
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
LY+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 123 LYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 121 bits (292), Expect = 2e-26
Identities = 63/156 (40%), Positives = 85/156 (54%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
+L+LQ RLAA V++CGK+ V P +S + IR + ++ K + SR R
Sbjct: 3 NLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSRGR 62
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
+R A+R GRH G GK GT ARMP K LW +KIDRHLY +
Sbjct: 63 IRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYET 122
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 123 LYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 112 bits (269), Expect = 1e-23
Identities = 55/150 (36%), Positives = 81/150 (54%)
Frame = +3
Query: 93 RSLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRA 272
++LK+Q R+AA +++CG+ +W+ P ++ A+ + + IR+ K G++ KKPV SR
Sbjct: 2 KTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRY 61
Query: 273 RVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYH 452
R R E ++KGRH G G G ARM +KELW KKIDR Y
Sbjct: 62 RARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYR 121
Query: 453 SLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 542
LY++AKG FK+K L ++ K R
Sbjct: 122 MLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 110 bits (264), Expect = 5e-23
Identities = 54/150 (36%), Positives = 85/150 (56%)
Frame = +3
Query: 114 RLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKNTE 293
RLA+ ++ CGKK +WL N I ++ + I++ K ++I K SR R RK E
Sbjct: 9 RLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRLE 68
Query: 294 ARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAK 473
A++KGRH G GK GTANARMPQK++W +I + + Y +AK
Sbjct: 69 AKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAK 128
Query: 474 GNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
G++FK++ + + I ++KA++ R K L++Q
Sbjct: 129 GHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 99.5 bits (237), Expect = 9e-20
Identities = 49/113 (43%), Positives = 69/113 (61%)
Frame = +3
Query: 225 KXGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXX 404
+ GL+I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 501 RYGLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRL 560
Query: 405 XXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 561 LRRYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 92.7 bits (220), Expect = 1e-17
Identities = 50/146 (34%), Positives = 71/146 (48%)
Frame = +3
Query: 99 LKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARV 278
+ +Q R+AA +++CG + VW+ P ++ S IR K G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 279 RKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 458
+K E R+KGR G G G A AR P KE W + KIDR +Y L
Sbjct: 66 KKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKL 125
Query: 459 YMKAKGNVFKNKRVLMEYIHRKKAEK 536
Y AKG F+++ L Y+ + K
Sbjct: 126 YRMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 87.4 bits (207), Expect = 4e-16
Identities = 46/139 (33%), Positives = 66/139 (47%)
Frame = +3
Query: 108 QXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKN 287
Q R+AA +++ G VW+ PN + A + IR+ K G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 288 TEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 467
E ++KGR G G G AR K W K ID Y LY K
Sbjct: 66 HEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKK 125
Query: 468 AKGNVFKNKRVLMEYIHRK 524
KGN+FK++ L+ Y+ +K
Sbjct: 126 VKGNLFKSRSHLLLYLKQK 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 55.2 bits (127), Expect(2) = 5e-16
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 432 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 563
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 52.4 bits (120), Expect(2) = 5e-16
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +3
Query: 102 KLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVR 281
+L R + +RCGK+ VWL P+ + N +S Q IRK + GL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 282 KNTEARRKGRHCGFGKXXGT 341
T ARR+G H G K GT
Sbjct: 90 --TLARRRGWHMGIRKRKGT 107
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/134 (29%), Positives = 57/134 (42%)
Frame = +3
Query: 114 RLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKNTE 293
++AA M+ G VW+ N I+ + S + +RK ++ KK +S R++K E
Sbjct: 8 QIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIE 67
Query: 294 ARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAK 473
KGR G G GT AR P+K W T KID+ Y Y K
Sbjct: 68 QLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIK 127
Query: 474 GNVFKNKRVLMEYI 515
F ++ L +I
Sbjct: 128 SGSFVSRAQLRNHI 141
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 64.5 bits (150), Expect = 3e-09
Identities = 41/106 (38%), Positives = 61/106 (57%)
Frame = -1
Query: 629 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 450
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 449 V*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTXSLTKATV 312
+ +P++L +V +Q + + L+L P L HT + T +LT V
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 64.1 bits (149), Expect = 4e-09
Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Frame = +3
Query: 102 KLQXRLAASVMRCGKKXVWLXPNXI--NXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
+ Q RLAA ++ G+ +W+ P+ + +R K G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
+ RRKGR G G+ G A AR+ KE W + IDR Y
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRR 123
Query: 456 LYMKAKGNVFKNKRVLMEYI 515
LYM AKG F++ L Y+
Sbjct: 124 LYMLAKGGTFRDLASLKRYM 143
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Frame = +3
Query: 108 QXRLAASVMR------CGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSR 269
Q RLAA + G VW+ P ++ ++ + +R+ G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 270 ARVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 449
+R RK + KGR G G G+ANAR P+K W I Y
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEY 125
Query: 450 HSLYMKAKGNVFKN 491
Y KAKG +++
Sbjct: 126 RYYYRKAKGGSYRS 139
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 55.2 bits (127), Expect = 2e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 252 VAVHSRARVRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 431
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 432 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 536
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 54.8 bits (126), Expect = 3e-06
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXG--LVIKKPVAVHSR 269
+LK Q RLAAS+ G + + + I ++ + IR K G +V+KK R
Sbjct: 3 NLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGR 62
Query: 270 ARVR-KNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 446
+ R K + +G+ G K G AR K++W K IDRH
Sbjct: 63 LKERRKKRSLKSEGKKSGSRK--GKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHT 120
Query: 447 YHSLYMKAKGNVFK 488
Y LY+K KG +K
Sbjct: 121 YRELYLKTKGGNYK 134
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 420 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 52.8 bits (121), Expect = 1e-05
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = -1
Query: 539 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 360
G+ LL + +L E + L + V+ V+ V LL V E+ NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 359 WHTRIGSTXSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETXLXXLTDVLXGVGV 189
+ +GST L A + L + VF+ G+D ++ LDD+ ++D+L GVG+
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGI 159
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 52.8 bits (121), Expect = 1e-05
Identities = 35/139 (25%), Positives = 53/139 (38%)
Frame = +3
Query: 99 LKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARV 278
L Q RLAA V+ G+ VW P+ + A+ + + IR+ G + + +SR R
Sbjct: 4 LSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRA 63
Query: 279 RKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 458
R+ G G G G A AR +K + + Y +
Sbjct: 64 RERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREM 123
Query: 459 YMKAKGNVFKNKRVLMEYI 515
Y A G F + R L Y+
Sbjct: 124 YNMANGGEFDSVRRLTNYV 142
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 460 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 639
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 640 CCRPSLEKTKPR 675
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = -2
Query: 574 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 398
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 397 LRTLCLCTHSSFCGIRALAVPLXLPKPQ*RPFLRASVFLRTRAREWT 257
R L L +F GI+ALAVP P PF R+ VF R RAREWT
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 50.8 bits (116), Expect = 4e-05
Identities = 35/141 (24%), Positives = 54/141 (38%)
Frame = +3
Query: 114 RLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKNTE 293
RLAA ++ G + + P + +R GL+ +P SR R R
Sbjct: 6 RLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRHI 65
Query: 294 ARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAK 473
++KGR G G G R ++E W K++ ++ LY K
Sbjct: 66 KKKKGRRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPRVWRQLYRMVK 122
Query: 474 GNVFKNKRVLMEYIHRKKAEK 536
GN F++ L YI+ K K
Sbjct: 123 GNYFRDLDHLKTYINEHKLAK 143
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 114 RLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRK 284
+ A +++CG+ VW+ PN +N + N Q I K K +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 49.2 bits (112), Expect = 1e-04
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Frame = +3
Query: 123 ASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRARVRKNTEARR 302
A ++ K + + + + +R K GL+ KP +SR R R E R+
Sbjct: 8 ARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRK 67
Query: 303 KGRHCGFGKXXGTANAR-MPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGN 479
GR G G GT AR KE+W ID+ + +LY AKG
Sbjct: 68 SGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGG 127
Query: 480 VFKNKRVLMEYI 515
F++ L Y+
Sbjct: 128 YFESLAHLRTYM 139
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 48.8 bits (111), Expect = 2e-04
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
++K A+ +++CG + + P + + N+ + I K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH--LY 449
+ ++ G G G+ GT NAR K LW K+ + L
Sbjct: 62 KKLRKAKKQSGLKRGIGRRKGTKNARKKYKILWIHKIRNQRKLLKMFRNKKQFLNYKILL 121
Query: 450 HSLYM--KAKGNVFKNKRVLMEYI 515
+ ++ K KGN F + + L+E++
Sbjct: 122 NKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 47.6 bits (108), Expect = 4e-04
Identities = 35/148 (23%), Positives = 61/148 (41%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
+L+ + RLA+ V G ++ P ++ A+ + IR + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
+ + K R G G AR+ +K+++ K I + +
Sbjct: 64 AQHKRRQKAK-RGSKAGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDRKDITNPEFWA 122
Query: 456 LYMKAKGNVFKNKRVLMEYIHRKKAEKA 539
LY K GN +NK L + KA+++
Sbjct: 123 LYKKVGGNTVRNKAHLHLLVDEIKAKRS 150
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 39.9 bits (89), Expect = 0.079
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
Frame = +3
Query: 96 SLKLQXRLAASVMRCGKKXVWLXPNXINXXANTNSXQXIRKXXKXGLVIKKPVAVHSRAR 275
+LK + RLA+ V G + + + A+ + + IR + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 276 VRKNTEARRKGRHCGFGKXXGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 455
+ +A+R R G G AR+ +KE++ K++ + +
Sbjct: 64 AQTK-KAQRNKRGTKQGSKQGRKGARVGKKEIYVAKVRSLRRLLKIAKDRKELTNPEFWA 122
Query: 456 LYMKAKGNVFKNK---RVLMEYIHRKK 527
LY K GN +NK R LME I K+
Sbjct: 123 LYKKVGGNTVRNKAHLRQLMEEIVAKR 149
>UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3;
Methanomicrobia|Rep: O-methyltransferase -
Methanosarcina acetivorans
Length = 349
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -1
Query: 716 YLLFTT*CXLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY-FIAAGLSLVAKHLRP 540
YL T C L+ K GF +S+G +Q+L+ G T+ L L Y +A +A+ +R
Sbjct: 65 YLNVLTACGLVIKKNGFYQNSQGAEQYLVTGSPTYYGDLILLEYERMAMSPKEIAERVRN 124
Query: 539 G 537
G
Sbjct: 125 G 125
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 9.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 462 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 563
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,368,660
Number of Sequences: 1657284
Number of extensions: 10608422
Number of successful extensions: 26578
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26545
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -