Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B12
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0549 - 4051257-4051709,4051967-4052075,4053194-4053252,405...    30   2.1  
08_01_0998 - 10136050-10138356                                         29   6.5  
06_03_1237 + 28602250-28604196                                         29   6.5  

>01_01_0549 -
           4051257-4051709,4051967-4052075,4053194-4053252,
           4053339-4053445,4053711-4053867,4054110-4054169,
           4055396-4055524,4056027-4056074,4057148-4057214,
           4057948-4058006
          Length = 415

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 473 LCATRXGDRIALFIAEGGPECFQQKTENL 559
           +CA+  G R+AL+  E GPE  +++  +L
Sbjct: 288 ICASIIGQRLALYALEAGPEWIRERVRDL 316


>08_01_0998 - 10136050-10138356
          Length = 768

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 134 GVLADDFSQITAVVTSQCTKNNAEDKVPXS*SSIAYLWKLPQGTGRF 274
           GV+  +   +TA+ T     N  E +VP S SS+  L+ L     RF
Sbjct: 298 GVIPPEIFNLTALRTIDVGTNRLEGEVPASISSLRNLYGLDLSNNRF 344


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 241 VRNAASTXRDFVFSIVLGALRGHNRCNLTKVISQH 137
           VR+ + T    V+  +LGA R H +  + KV+++H
Sbjct: 435 VRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEH 469


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,265,387
Number of Sequences: 37544
Number of extensions: 479652
Number of successful extensions: 1363
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)