Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B10
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   7.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   7.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   7.3  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.6  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 562 QRLAFSYTIAFKSTHPEPAGGAFHMTWTSV 473
           QR+A ++  A   T P  A   FH   TS+
Sbjct: 129 QRMAIAWPYAAVYTDPAFAASIFHAAATSL 158


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/21 (33%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +3

Query: 546 ENASRWF-AEDGQLTKRICED 605
           E   +++   DGQ+T+++C D
Sbjct: 50  EQCDKYYECNDGQITEKLCPD 70


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 381 LLGALLVSGFKGSRIILK 328
           LLG  L+SGF+  +I  K
Sbjct: 62  LLGTFLISGFQMQKIATK 79


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 381 LLGALLVSGFKGSRIILK 328
           LLG  L+SGF+  +I  K
Sbjct: 62  LLGTFLISGFQMQKIATK 79


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 493 HMTWTSVLGRSSASTTEFVHS 431
           HM   SV   ++A   EFVHS
Sbjct: 55  HMPPHSVFAANNAEFPEFVHS 75


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 493 HMTWTSVLGRSSASTTEFVHS 431
           HM   SV   ++A   EFVHS
Sbjct: 55  HMPPHSVFAANNAEFPEFVHS 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,906
Number of Sequences: 336
Number of extensions: 3717
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)