Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B10
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens ...    96   1e-19
AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.       96   1e-19
AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.     96   1e-19
U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.                 36   0.15 
AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.              34   0.78 

>AK074803-1|BAC11217.1|  807|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90322 fis, clone NT2RP2001755, highly similar to
           Rattus norvegicus f-spondin mRNA. ).
          Length = 807

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
 Frame = +3

Query: 393 FQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAE 572
           FQ+  +  T+F   C  +V E+    +T +QV W APPAG+GCV+LKA + +    +F +
Sbjct: 114 FQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQD 173

Query: 573 DGQLTKRICED-------TSLSIPDCCACDDAKYXMVFEGLWSPXTH 692
           +G LTK++CE        T   I DCCAC  AKY + F G WS  TH
Sbjct: 174 EGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEKTH 220


>AB051390-1|BAB18461.1|  807|Homo sapiens VSGP/F-spondin protein.
          Length = 807

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
 Frame = +3

Query: 393 FQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAE 572
           FQ+  +  T+F   C  +V E+    +T +QV W APPAG+GCV+LKA + +    +F +
Sbjct: 114 FQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQD 173

Query: 573 DGQLTKRICED-------TSLSIPDCCACDDAKYXMVFEGLWSPXTH 692
           +G LTK++CE        T   I DCCAC  AKY + F G WS  TH
Sbjct: 174 EGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEKTH 220


>AB018305-1|BAA34482.2|  724|Homo sapiens KIAA0762 protein protein.
          Length = 724

 Score = 96.3 bits (229), Expect = 1e-19
 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
 Frame = +3

Query: 393 FQLFADTLTKFDEECTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAE 572
           FQ+  +  T+F   C  +V E+    +T +QV W APPAG+GCV+LKA + +    +F +
Sbjct: 31  FQIIDEEETQFMSNCPVAVTESTPRRRTRIQVFWIAPPAGTGCVILKASIVQKRIIYFQD 90

Query: 573 DGQLTKRICED-------TSLSIPDCCACDDAKYXMVFEGLWSPXTH 692
           +G LTK++CE        T   I DCCAC  AKY + F G WS  TH
Sbjct: 91  EGSLTKKLCEQDSTFDGVTDKPILDCCACGTAKYRLTFYGNWSEKTH 137


>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
          Length = 3460

 Score = 36.3 bits (80), Expect = 0.15
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 435 CTNSVVEADDLPKTEVQVMWKAPPAGSGCVLLKAMVYENASRWFAEDGQLTKRICE 602
           C+        LP T +  +W APPAG+GCV   A         F +   L +++CE
Sbjct: 126 CSVVASHVSHLPTTNLSFIWIAPPAGTGCVNFMATATHRGQVIFKD--ALAQQLCE 179


>AC073208-1|AAP22355.1|   44|Homo sapiens unknown protein.
          Length = 44

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 435 CTNSVVEADDLPKTEVQVMWKAPPAGSGCV 524
           C+        LP T +  +W APPAG+GCV
Sbjct: 13  CSVVASHVSHLPTTNLSFIWIAPPAGTGCV 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,879,535
Number of Sequences: 237096
Number of extensions: 2508543
Number of successful extensions: 5459
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5456
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)