Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B09
         (1072 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75N03 Cluster: E3 ubiquitin-protein ligase Hakai; n=36...    38   0.58 
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    35   3.1  
UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1; ...    34   7.2  

>UniRef50_Q75N03 Cluster: E3 ubiquitin-protein ligase Hakai; n=36;
            Euteleostomi|Rep: E3 ubiquitin-protein ligase Hakai -
            Homo sapiens (Human)
          Length = 491

 Score = 37.5 bits (83), Expect = 0.58
 Identities = 27/112 (24%), Positives = 28/112 (25%), Gaps = 1/112 (0%)
 Frame = +1

Query: 709  PPPXTRTPPXXHPPXXXX-RNXAXXXNXXXTGRXPGRXADPPXQTPPXXXXXXXXXXXXX 885
            PPP T  PP   PP            N    G  P +   PP   PP             
Sbjct: 374  PPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFT 433

Query: 886  XXXXXXXXHXTXPXXAXPXRXPTXXXPXAPXRXXGPXXPNXXPAXPXXTXTR 1041
                      T P    P   P    P  P R  GP      P       TR
Sbjct: 434  EDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHHPDQTR 485


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
           Obtectomera|Rep: Antibacterial peptide - Bombyx mori
           (Silk moth)
          Length = 66

 Score = 35.1 bits (77), Expect = 3.1
 Identities = 21/44 (47%), Positives = 21/44 (47%)
 Frame = +3

Query: 276 WDNKKXXXXXXXXXXXSXISAGXAIXGLXKAKGXXDSPEXKEXE 407
           WD  K           S ISAG AI  L KAKG  DS E KE E
Sbjct: 23  WDFFKELEGVGQRVRDSIISAGPAIDVLQKAKGLVDSSESKEDE 66


>UniRef50_A4R5L4 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 737

 Score = 33.9 bits (74), Expect = 7.2
 Identities = 21/76 (27%), Positives = 22/76 (28%)
 Frame = +1

Query: 619 PXKPXXXXRSXXQXTEPXGKXXPKNXAXGXPPPXTRTPPXXHPPXXXXRNXAXXXNXXXT 798
           P KP    R         GK  P   A    PP  + PP   PP     N          
Sbjct: 290 PNKPPPPDRPPPSRLAGSGKPPPSKLAGSGKPPPNKPPPGGRPP---PSNPPPPVRPPPP 346

Query: 799 GRXPGRXADPPXQTPP 846
           G  P     PP   PP
Sbjct: 347 GEPPLPDNPPPPDEPP 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.134    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,397,887
Number of Sequences: 1657284
Number of extensions: 4669185
Number of successful extensions: 9658
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8899
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 103274886922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)