Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B07
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            58   5e-10
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   5.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 57.6 bits (133), Expect = 5e-10
 Identities = 26/81 (32%), Positives = 46/81 (56%)
 Frame = +3

Query: 390 NVTXEKSFENIKNWIRNIEXNASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFV 569
           ++    SF   K W++ ++  AS ++   + GNK DL + R V  E  +Q A + ++ F+
Sbjct: 105 DIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDNRLLFM 164

Query: 570 ETSAKDSLNVEYAFYTLARDI 632
           ETSAK ++NV   F  +A+ +
Sbjct: 165 ETSAKTAVNVNDIFLAIAKKL 185



 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 158 LLIGASGVGXXSILFRFSXAAFXXSFXSXIGXXFKIRTXALXGKKVKLQXWXXAGQARFR 337
           +L+G S VG  S++ RF    F     S IG  F  +T  +    VK + W  AGQ R+ 
Sbjct: 28  VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYH 87

Query: 338 TITTAYXRGSMGIMLVYE 391
           ++   Y RG+   ++VY+
Sbjct: 88  SLAPMYYRGAQAAIVVYD 105


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 390 NVTXEKSFENIKNWIRNIEXNASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQI 560
           + T ++ ++NIK W+  +  N  ++    +LGN    D++R VS   G   A  YQI
Sbjct: 329 DTTGQQFYDNIKRWLDVVPENRFSN---WVLGNH---DNKR-VSSRLGVARADLYQI 378


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 15/68 (22%), Positives = 33/68 (48%)
 Frame = +3

Query: 456 SADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIK 635
           SA ++ + L  KC  + ++Q ++ + E  AI  + K +ETS    + +          ++
Sbjct: 241 SATLKDLKLAKKCTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLE 300

Query: 636 AKMEKKQE 659
            K E+ ++
Sbjct: 301 EKTERLED 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,705
Number of Sequences: 2352
Number of extensions: 7587
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)