Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B05
         (895 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.5  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 415 LDLSVAIFLPVSRSHNLQEXXPPP 344
           LD  V+I +P+S  H   E  P P
Sbjct: 383 LDKGVSIMVPISGLHYDPEYYPDP 406


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 352  PPPVMRLXDCQSTSRHHITPPWPLK 278
            PP V    D  ++S  H+ P W  K
Sbjct: 1014 PPQVTTGVDTGASSTEHMHPDWTTK 1038



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 291  GGVIWCLDVD 320
            GG+IW LD+D
Sbjct: 1734 GGMIWALDLD 1743



 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 291  GGVIWCLDVD 320
            GG+IW LD+D
Sbjct: 2159 GGMIWALDLD 2168



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 291  GGVIWCLDVD 320
            GG++W LD+D
Sbjct: 2657 GGMVWALDLD 2666


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 671 LVKKSTLLKSIPTXSPI 721
           L +++ LL+ +PT SP+
Sbjct: 105 LSERAALLRGVPTLSPV 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,085
Number of Sequences: 336
Number of extensions: 3717
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)