Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_B03
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   7.5  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 376 KLTSRFNNTSIYGIRFKYHFPIALAEPRTSXAGPALTMPXR 254
           +L + + NT +  +  ++HF   L  PR      +L +  R
Sbjct: 6   RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 46


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 376 KLTSRFNNTSIYGIRFKYHFPIALAEPRTSXAGPALTMPXR 254
           +L + + NT +  +  ++HF   L  PR      +L +  R
Sbjct: 137 RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 177


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 357 IILVFMVYVLNIIF 316
           ++LVF+ Y  NI+F
Sbjct: 79  VLLVFLTYFFNILF 92


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 357 IILVFMVYVLNIIF 316
           ++LVF+ Y  NI+F
Sbjct: 75  VLLVFLTYFFNILF 88


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 447 NVCQSFLSDKRYVVKLKIN 503
           ++CQ   S K+ +VK+KI+
Sbjct: 312 DLCQEANSTKKLIVKIKID 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,639
Number of Sequences: 336
Number of extensions: 905
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)