Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B02
(866 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 207 3e-52
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 192 1e-47
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 107 2e-42
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 161 2e-38
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 159 1e-37
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 128 1e-28
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 128 2e-28
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 118 3e-25
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 116 6e-25
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 113 7e-24
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 103 6e-21
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 102 1e-20
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 60 9e-08
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 55 2e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 47 7e-04
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 46 0.002
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 46 0.002
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 40 0.11
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 39 0.14
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 38 0.44
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 36 1.8
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 5.4
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 207 bits (505), Expect = 3e-52
Identities = 95/143 (66%), Positives = 107/143 (74%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 408
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 409 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGAR 588
Y TG E+NVEPVD+GP AF C+ DV L RTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 589 VFGAMXGAVDGGLNVPHSIXRFP 657
VFGAM GAVDGGLN+PHS+ RFP
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFP 181
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV Q FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 37.5 bits (83), Expect = 0.44
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXD 757
Y A + FNA+ H AHIFG VA+Y LE +
Sbjct: 183 YSAETKSFNADVHRAHIFGQHVADYMRSLEEE 214
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 192 bits (467), Expect = 1e-47
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 107 bits (257), Expect(2) = 2e-42
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVK 381
VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 38 VQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 89.0 bits (211), Expect(2) = 2e-42
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +1
Query: 499 EYNVEPVDNGPXAFXCYXDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
EYNVE V+NGP AF CY DV L RTTTGA VF AM GAVDGGLN+PHS RFP
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFP 150
Score = 60.9 bits (141), Expect = 4e-08
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV Q FK +QVKFK RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
Score = 41.9 bits (94), Expect = 0.020
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXD 757
YDA S FNAE H AHIFG VA+Y LE +
Sbjct: 152 YDAESKTFNAEAHRAHIFGQHVADYMHALEDE 183
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 161 bits (391), Expect = 2e-38
Identities = 80/144 (55%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPXAFXCYXDVXLXRTTTG 582
AY+TG +YNVE D P F D+ L RTTTG
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTG 155
Query: 583 ARVFGAMXGAVDGGLNVPHSIXRF 654
+++F M G DGG+NVPHS RF
Sbjct: 156 SKIFAVMKGVADGGINVPHSESRF 179
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
G VKV+ FK YQVK + RREGKTDYYARKRL
Sbjct: 2 GLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 159 bits (385), Expect = 1e-37
Identities = 72/142 (50%), Positives = 90/142 (63%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 408
QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+YG+K GLTNYAA
Sbjct: 48 QDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAAT 107
Query: 409 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGAR 588
Y+TG +Y+VE D F C+ D L RT+TGAR
Sbjct: 108 YATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGAR 167
Query: 589 VFGAMXGAVDGGLNVPHSIXRF 654
VF A+ GAVDGGL++PH+ RF
Sbjct: 168 VFAALKGAVDGGLDIPHNEKRF 189
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 128 bits (310), Expect = 1e-28
Identities = 61/144 (42%), Positives = 81/144 (56%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YAA
Sbjct: 327 IQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAA 386
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY+TG +NV+ F D L RTTTG
Sbjct: 387 AYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGN 446
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
RVFG + GA DGG+N+PHS RFP
Sbjct: 447 RVFGVLKGACDGGINIPHSESRFP 470
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 128 bits (308), Expect = 2e-28
Identities = 67/150 (44%), Positives = 85/150 (56%), Gaps = 6/150 (4%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAA
Sbjct: 61 LQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAA 120
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV------EPVDNGPXAFXCYXDVXLX 567
AY+TG V E D F DV L
Sbjct: 121 AYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLA 180
Query: 568 RTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
RTTTGARVFG + GAVDGG+ VPH RFP
Sbjct: 181 RTTTGARVFGVLKGAVDGGMAVPHRPNRFP 210
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +3
Query: 120 FVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
FVKVV FK +QVK++ RREGKTDY+AR+++
Sbjct: 26 FVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 118 bits (283), Expect = 3e-25
Identities = 67/160 (41%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +1
Query: 187 KGKLIIMLVNASXVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELP 366
+GK A +QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 367 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXA 537
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 538 FXCYXDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
+ DV + RTTTG RVF A+ GA DGGLN+PH RFP
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFP 184
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3
Query: 120 FVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
+VKVV FK YQVK++ RREGKTDY ARK L
Sbjct: 3 YVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 116 bits (280), Expect = 6e-25
Identities = 61/144 (42%), Positives = 83/144 (57%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R+G+ GLTNYAA
Sbjct: 38 VQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY+TG + N++ P F D+ L R+T G
Sbjct: 98 AYATG---LLLARRTLKTLKMDKFYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGN 152
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
RVF A+ GA DGG+++PH+ RFP
Sbjct: 153 RVFAALKGAADGGIHIPHNNRRFP 176
Score = 50.4 bits (115), Expect = 6e-05
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +3
Query: 120 FVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRLXCSGQEQ 242
FVK+V FK +Q KF+ RREGKTDYYAR RL +++
Sbjct: 3 FVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 113 bits (271), Expect = 7e-24
Identities = 60/141 (42%), Positives = 77/141 (54%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 408
QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 409 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGAR 588
Y+TG EY + + P F DV L RTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 589 VFGAMXGAVDGGLNVPHSIXR 651
VF M GAVDGGL +PH++ R
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR 173
Score = 33.9 bits (74), Expect = 5.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 126 KVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
K+V F +Q KF+ RRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 103 bits (247), Expect = 6e-21
Identities = 57/127 (44%), Positives = 67/127 (52%)
Frame = +1
Query: 277 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 456
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 457 XXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGARVFGAMXGAVDGGLNVP 636
Y+VE +N F DV + TTG RVFGA+ GA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 637 HSIXRFP 657
HS RFP
Sbjct: 124 HSEKRFP 130
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 102 bits (244), Expect = 1e-20
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 408
QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 409 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPXAFXCYXDVXLXRTTTGA 585
Y+TG Y+V + +D A + D+ L R+T GA
Sbjct: 93 YATG--FLIGRRALTAMSLDEVYRPKEIDGTYSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 586 RVFGAMXGAVDGGLNVPHSIXRF 654
RVFGA+ GA D GLNVPHS +F
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKF 173
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 265 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 420
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 42.3 bits (95), Expect = 0.015
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 562 LXRTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
L RTTTG +VFGA+ VD GL++PHS FP
Sbjct: 72 LARTTTGNKVFGALKEPVDCGLSIPHSTKCFP 103
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 59.7 bits (138), Expect = 9e-08
Identities = 38/138 (27%), Positives = 61/138 (44%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 408
QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 409 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGAR 588
Y G YN + N D+ L R T G +
Sbjct: 99 YLLG-----------YYFGKDLIEKVKQSETYNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 589 VFGAMXGAVDGGLNVPHS 642
F +M G+VD G+N+PH+
Sbjct: 145 SFASMKGSVDSGINIPHN 162
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1
Query: 229 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 330
QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
Score = 39.5 bits (88), Expect = 0.11
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +3
Query: 120 FVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
FVK K +QVKFK RR GKTDY AR RL
Sbjct: 14 FVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 46.8 bits (106), Expect = 7e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +1
Query: 499 EYNVEPVDNGPXAFXCYXDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIXRF 654
+Y+VE NG F + +V L +T+ G VFG + A+DG LN+PH+ RF
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRF 93
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 262 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 420
R++VR +N+ + Q+ +EGD + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 553 DVXLXRTTTGARVFGAMXGAVDGGLNVPH 639
D+ L R GARVF A+ GAVD GL+VP+
Sbjct: 104 DIGLARAKPGARVFAALKGAVDAGLDVPY 132
Score = 33.9 bits (74), Expect = 5.4
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3
Query: 159 YQVKFKXRREGKTDYYARKRLXCSG 233
Y V F+ R EGKTDYY R L SG
Sbjct: 7 YFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 45.6 bits (103), Expect = 0.002
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 420
K R+ VR+SN+ + Q +RIEGD ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 38.3 bits (85), Expect = 0.25
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 553 DVXLXRTTTGARVFGAMXGAVDGGLNVPHS 642
DV L + G+RVF A+ GA+D G+ +PHS
Sbjct: 105 DVGLHKPVKGSRVFAALKGALDAGVEIPHS 134
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 159 YQVKFKXRREGKTDYYARKRLXCSGQEQI 245
Y+V + RREGKT+YY R RL SG+ ++
Sbjct: 7 YRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 39.5 bits (88), Expect = 0.11
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 256 KYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 420
K RL+ R SNK V Q+ GD + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 35.9 bits (79), Expect = 1.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 553 DVXLXRTTTGARVFGAMXGAVDGGLNVPHS 642
D+ L T G++VF GA+D GL++PH+
Sbjct: 104 DIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 39.1 bits (87), Expect = 0.14
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 553 DVXLXRTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
DV L T+G RVF A+ G VD GL++PH P
Sbjct: 107 DVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 37.5 bits (83), Expect = 0.44
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 159 YQVKFKXRREGKTDYYARKRLXCSGQEQI 245
Y+V F+ RREG+T+Y+ R +L SGQ+++
Sbjct: 7 YKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 37.1 bits (82), Expect = 0.58
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 262 RLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 420
R++VR S ++V Q+ EGD +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 553 DVXLXRTTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
D+ L ++ G+RV+ A+ G VD G +P S FP
Sbjct: 104 DIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 162 QVKFKXRREGKTDYYARKRLXCSGQEQI*HT*ISSDCASLQQRCNMP 302
+++F+ +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 5.4
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 262 RLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 420
R IVR++ K V QVA YS I GD I+ L +YGV + N Y G
Sbjct: 29 RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLAKYGVDLRGNNIQVCYLVG 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,810,299
Number of Sequences: 1657284
Number of extensions: 8761219
Number of successful extensions: 18092
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18078
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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