Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_B02
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 192 2e-48
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 192 2e-48
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 192 2e-48
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 192 2e-48
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 192 2e-48
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 192 2e-48
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 190 7e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 155 3e-37
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 4e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 51 5e-06
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDED 217
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 192 bits (467), Expect = 2e-48
Identities = 87/144 (60%), Positives = 102/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFP 188
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 9 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 190 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 224
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 190 bits (462), Expect = 7e-48
Identities = 86/144 (59%), Positives = 101/144 (70%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 406 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGA 585
AY TG EYNVE +D P AF CY D L RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 586 RVFGAMXGAVDGGLNVPHSIXRFP 657
+VFGA+ GAVDGGL++PHS RFP
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFP 181
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 183 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 155 bits (375), Expect = 3e-37
Identities = 71/125 (56%), Positives = 85/125 (68%)
Frame = +1
Query: 265 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 444
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 445 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYXDVXLXRTTTGARVFGAMXGAVDGG 624
EYNVE +D P AF CY D L RTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 625 LNVPH 639
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 4e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +1
Query: 226 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 405
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 406 A 408
A
Sbjct: 98 A 98
Score = 58.8 bits (136), Expect = 2e-08
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +3
Query: 117 GFVKVVXXXQXFKXYQVKFKXRREGKTDYYARKRL 221
GFVKVV FK YQVKF+ RREGKTDYYARKRL
Sbjct: 2 GFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 51.2 bits (117), Expect = 5e-06
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +1
Query: 571 TTTGARVFGAMXGAVDGGLNVPHSIXRFP 657
TTTG +VFGA+ GAVDGGL++PHS RFP
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFP 29
Score = 35.9 bits (79), Expect = 0.19
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 662 YDAXSXKFNAEXHXAHIFGLXVAEYXXXLEXDXXD 766
YD+ S +FNAE H HI G VA+Y L + D
Sbjct: 31 YDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,790,711
Number of Sequences: 237096
Number of extensions: 1418319
Number of successful extensions: 2337
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2328
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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