Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_A18
(909 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 36 0.011
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 34 0.032
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.042
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.23
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.23
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.52
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 29 0.91
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 28 1.6
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 2.1
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 28 2.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.7
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 26 6.4
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 26 6.4
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 26 8.5
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 35.5 bits (78), Expect = 0.011
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Frame = +2
Query: 401 ALYNVQNLFSGXGTISNIYRGVWAPLGGIAAVNAIVFGAYGNTRRALSE---PDSLKTHX 571
AL V+ + G ++ Y+G PL GI +I F + +R S P ++ +
Sbjct: 58 ALDCVKKISKNEG-LAAFYKGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYY 116
Query: 572 XXXXXXXXXXXXXXXPVELIKTRQQLASAGEGMPMEPWAGARXIVKIGGFKALFRGLGIX 751
PVE ++ R Q+ + + PW + I G + +G
Sbjct: 117 VSGAISGLANSFLVGPVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGLSGIMKGYNPT 176
Query: 752 VXRDSPXFAIYFTSYXLMTR 811
R++ +YF +Y + +
Sbjct: 177 AAREAHGLGMYFLAYEALVK 196
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 33.9 bits (74), Expect = 0.032
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 704 VKIGGFKALFRGLGIXVXRDSPXFAIYFTSYXLM 805
VK GGF ++RGLG + +P +++FT+Y M
Sbjct: 117 VKNGGFHGVYRGLGSILVGSAPGASLFFTTYENM 150
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.5 bits (73), Expect = 0.042
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Frame = +2
Query: 452 IYRGVWAPLGGIAAVNAIVFGAYGNTRRALSE-----PDSLKTHXXXXXXXXXXXXXXXX 616
++RG+ L G +I F +YGN +R L++ ++ + H
Sbjct: 122 LFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVITSAATN 181
Query: 617 PVELIKTRQQLASAGEGMPMEPWAGARXIVK---IGGFKALFRGL 742
P+ L+KTR QL G + + I+K + GF+ L++GL
Sbjct: 182 PIWLVKTRLQL-DKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGL 225
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 683 WAGARXIVKIGGFKALFRGLGIXVXRDSPXFAIYFTSYXL 802
++ R I K G FRG G+ RD+P +Y Y L
Sbjct: 145 YSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYEL 184
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 671 PMEPWAGARXIVKIGGFKALFRGLGIXVXRDSPXFAIYFTSY 796
P+ + A IV+ GF AL+ G + RD+ A YFT Y
Sbjct: 158 PLSSFQSASDIVRRYGFTALWNGYRYHLTRDALGSACYFTIY 199
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.52
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 617 PVELIKTRQQLASAGEGMPMEPWAGARXIVKIGGFKALFRGLGIXVXRDSPXFAIYFTS 793
P++++KTR QL S G+ + + IVK G L+RG+ + ++P A+ F S
Sbjct: 28 PLDVVKTRMQL-SVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFAS 85
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 692 ARXIVKIGGFKALFRGLGIXVXRDSPXFAIYFTSY 796
+R IV G + L+RGL V R + + FT+Y
Sbjct: 150 SRIIVHENGIRGLYRGLAATVARQAANSGVRFTAY 184
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 28.3 bits (60), Expect = 1.6
Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 11/122 (9%)
Frame = +2
Query: 437 GTISNIYRGVWAPLGGIAAVNAIVFGAYGNTRRALSE----PDSLKTHXXXXXXXXXXXX 604
G +Y GV L G A+ F +Y T+R L P++L
Sbjct: 67 GVFHGLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETL-CFLLAGFVGDLFAS 125
Query: 605 XXXXPVELIKTRQQLASAGEGMPME------PWAGA-RXIVKIGGFKALFRGLGIXVXRD 763
P E++KTR QL + + GA + I K G K F G + RD
Sbjct: 126 VVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRD 185
Query: 764 SP 769
P
Sbjct: 186 IP 187
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +2
Query: 617 PVELIKTRQQLASA----GEGMPMEPWAGA----RXIVKIGGFKALFRGLGIXVXRDSPX 772
P++++KTR+Q A G G G R I G L+RG+G + P
Sbjct: 25 PLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPS 84
Query: 773 FAIYFTSY 796
++IYF Y
Sbjct: 85 WSIYFVVY 92
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -1
Query: 729 RALNPPIFTIXLAPAQGSIGIPSP---ALASCCRVLISS 622
RALN P+F +G+IGI +P L+S +++SS
Sbjct: 519 RALNDPVFVKKSFCTEGNIGIKNPPKHPLSSTAEIVLSS 557
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 558 NESGSDRALLVFPYAPKTIALTAAMPPSGAHT 463
N+ GSD + P P +AL A PPS A T
Sbjct: 1870 NDDGSDLSNQAAPPPPPPMALPKAGPPSAAPT 1901
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 617 PVELIKTRQQLASA-GEGMPMEPWAGARXIVKIGGFKALFRGLGIXVXRDSPXFAIYFT 790
PV+ IKTR Q+ + + I G +L+RG+ + P AIYF+
Sbjct: 39 PVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHAIYFS 97
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 6.4
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 4/147 (2%)
Frame = +2
Query: 368 P*KYTYSRVEAALYNVQNLFSGXGTISNIYRGVWAPLGGIAAVN----AIVFGAYGNTRR 535
P + R + + +V +F I N YR +W G+ N A F Y ++
Sbjct: 103 PAEVVRQRAQISKTSVSQIFQSM--IHN-YRDLWHSFKGMCGRNVPATAFQFVLYEQFKK 159
Query: 536 ALSEPDSLKTHXXXXXXXXXXXXXXXXPVELIKTRQQLASAGEGMPMEPWAGARXIVKIG 715
S D + P+++IKT+ L P R I K
Sbjct: 160 KFSATDHVFGAPKGAALSGAITAAVLTPLDVIKTQINLR------PESYRKVVRRIYKEN 213
Query: 716 GFKALFRGLGIXVXRDSPXFAIYFTSY 796
G +GLG+ V S +IY +Y
Sbjct: 214 GIFGFEKGLGLRVFASSLGLSIYLGTY 240
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 25.8 bits (54), Expect = 8.5
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 377 YTYSRVEAALYN-VQNLFSGXGTISNIYRGVWAPLGGIAAVNAIVFGAYGNTRRALSEPD 553
Y YSR LY +++++ G + +Y+G A L + I F AY RR L
Sbjct: 55 YAYSR--HGLYKAIKHIYHVYG-LHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDP 111
Query: 554 SLKTH 568
+TH
Sbjct: 112 EHETH 116
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,059,826
Number of Sequences: 5004
Number of extensions: 56524
Number of successful extensions: 111
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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