Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_A16
(870 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 35 0.013
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 34 0.023
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 29 0.65
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 29 0.65
SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyce... 28 2.0
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 27 2.6
SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase S... 27 3.5
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 27 3.5
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 27 3.5
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 26 6.1
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 26 6.1
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 35.1 bits (77), Expect = 0.013
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 597 EMRLLRELRHDNLNSFIGAVVEPMRVLILTDYCAQGSLYDII 722
EM +L L H N+ ++ G V +V I ++C GSL D++
Sbjct: 1086 EMTVLERLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLADLL 1127
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 34.3 bits (75), Expect = 0.023
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 597 EMRLLREL---RHDNLNSFIGAVVEPMRVLILTDYCAQGSLYDIIXXXDLP 740
E+ +LR+L RH N+ F+ + + + ++ +YC G LY+ I D P
Sbjct: 55 EVNILRQLSRSRHRNIIHFVESFEDNVYYYVVLEYCPLGDLYECILNNDFP 105
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 29.5 bits (63), Expect = 0.65
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 612 RELRHDNLNSFIGAVVEPMRVLILTDYCAQGSLYD 716
R L H N+ V R+ + +YC G LYD
Sbjct: 78 RRLLHPNITRLYEVVCTEDRIYLAMEYCPNGELYD 112
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 29.5 bits (63), Expect = 0.65
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 597 EMRLLRELRHDNLNSFIGAVVEPMRVLILTDYCAQGSLYDI 719
E+ LL+ L H N+ + G+ + I+ +YC GSL I
Sbjct: 56 EIDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSI 96
>SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +2
Query: 389 SLGNRRT----GSYRIFRQRPRVLAQ*VMSSERYIIRNVPTKIHHDGAIQREFSXDK 547
SLGNRR + + Q P + A+ + +E RN+P + + IQR S K
Sbjct: 30 SLGNRRKKRGLSGWEPYFQEPELTAEEKLENETLYSRNIPLTVRMERFIQRYRSRRK 86
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/55 (21%), Positives = 26/55 (47%)
Frame = +3
Query: 528 GNLVXIKTLXFXXXXXXXXXXXXEMRLLRELRHDNLNSFIGAVVEPMRVLILTDY 692
G +V +K + E+ L++ELRH N+ S + +++++ +Y
Sbjct: 26 GEIVALKVIRIDADEGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEY 80
>SPAC23H4.17c |srb10|prk1, cdk8|cyclin-dependent protein kinase
Srb10 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +3
Query: 597 EMRLLRELRHDNLNSFIGAVVEPMRVLILTDYCAQGSLYDII 722
EM L RE++H+N+ S + +++ + ++ +Y A+ L II
Sbjct: 61 EMMLCREIQHENIVSLVQVLLKDGTISMVFEY-AEHDLLQII 101
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 119 PVAHFQQNSKEFPDYKLNSRYTDR 190
P+A +N+KE PD++ S Y +R
Sbjct: 21 PIARLLKNAKETPDHRFISVYNER 44
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 597 EMRLLRELRHDNLNSFIGAVVEPMRVLILTDYCAQGSLYD 716
E+ LLR + H N+ I + ++ ++ +Y G L+D
Sbjct: 58 ELVLLRLIEHPNVLQLIDVISAQEQLFVVVEYMPGGELFD 97
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 189 DWPDSVKPEDEPSCGFNNEKCPRH 260
+WP + D P+ NN K P H
Sbjct: 144 EWPQWLASHDIPTLAINNPKLPMH 167
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +3
Query: 597 EMRLLRELRHDNLNSFIGAVVEPMRVLILTDYCAQGSL 710
E+ +L+E+RH ++ I + + ++ +YC+ G L
Sbjct: 61 EISILKEIRHVHVVELIDCIKAGRFIHLVMEYCSLGDL 98
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,016,094
Number of Sequences: 5004
Number of extensions: 57188
Number of successful extensions: 158
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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