Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_A08
(872 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.23
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.91
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.7
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 4.9
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 6.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.4
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 6.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 8.5
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 22 8.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 8.5
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPLAA 268
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 25.0 bits (52), Expect = 0.91
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -1
Query: 263 NDRAQRVSERGSGRAPNTQTASPRALADSLMQEKTXH---TXTLNLKHKMNAIVVV 105
NDR+ R++ G ++ +S + LM+E+T T TLNLKH A++V+
Sbjct: 23 NDRS-RIARLGRDDGGKSRQSSFE-VTSLLMREETEDAEDTQTLNLKHLRAAVLVL 76
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.7
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 488 DTRRFPLEAPSCALLFRPCR 547
+ R FP++ SC L+ C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPL 274
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPL 274
S +LS + +L ++PP S IPL
Sbjct: 286 SILLSLTVFFLLLAEIIPPTSLAIPL 311
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 594 KRHASRREKGGQVSGKRQGRNRRAH 520
KR +++ +G + + +NRRAH
Sbjct: 39 KRPKTKKSQGSRTTHNELEKNRRAH 63
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPL 274
S ++S + +L + ++PP S ++PL
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPL 306
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPL 274
S ++S + +L + ++PP S ++PL
Sbjct: 281 SILISLHVFFLLVVEIIPPTSLVVPL 306
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.2 bits (45), Expect = 6.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 351 SHVLSCVIXLILWITVLPPLSELIPL 274
S +LS + +L ++PP S +PL
Sbjct: 273 SILLSLTVFFLLLAEIIPPTSLTVPL 298
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 8.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 444 STLKSEVAKXDRTIKIPGVSPWKLPRALS 530
S++ +VA R IP +SP +ALS
Sbjct: 79 SSVSLQVANLLRLFHIPQISPASTAKALS 107
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 450 LKSEVAKXDRTIKIPGVSP 506
L+SE+A+ + IK+ +SP
Sbjct: 175 LRSELAQCESNIKVISISP 193
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 8.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 444 STLKSEVAKXDRTIKIPGVSPWKLPRALS 530
S++ +VA R IP +SP +ALS
Sbjct: 169 SSVSLQVANLLRLFHIPQISPASTAKALS 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,819
Number of Sequences: 438
Number of extensions: 3106
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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