Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_A06
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     34   0.78 
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    34   0.78 
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    34   0.78 
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    33   1.4  

>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = -1

Query: 407 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 240
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 239 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLPLAKHAHNNNNATLLDILTCVSILV 75
           R T   A  + S      PA    R   GT LP             L ++ CV +L+
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLPKFTWREGQKQ---LPLIGCVLLLI 171


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = -1

Query: 407 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 240
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 239 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLPLAKHAHNNNNATLLDILTCVSILV 75
           R T   A  + S      PA    R   GT LP             L ++ CV +L+
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLPKFTWREGQKQ---LPLIGCVLLLI 171


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = -1

Query: 407 ATPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPV 240
           A+P+ +P PG   P R SP   + +RASPA A+LS   S +S+   + S   S      V
Sbjct: 59  ASPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLV 117

Query: 239 RGTFRAAPEVPSEFTVKLPA--CLRARVGTCLPLAKHAHNNNNATLLDILTCVSILV 75
           R T   A  + S      PA    R   GT LP             L ++ CV +L+
Sbjct: 118 RATPVGAVPIRSSPARSAPATRATRESPGTSLPKFTWREGQKQ---LPLIGCVLLLI 171


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
 Frame = -1

Query: 404 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 237
           TP     PG   P + SP   + +RASPA A+LS   S +S+   + S   S      VR
Sbjct: 64  TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 123

Query: 236 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLPLAKHAHNNNNATLLDILTCVSILV 75
            T   A  + S      PA    R   GT LP             L ++ CV +L+
Sbjct: 124 ATPVGAVPIRSSPARSAPATRATRESPGTSLPKFTWREGQKQ---LPLIGCVLLLI 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,743,159
Number of Sequences: 237096
Number of extensions: 1827906
Number of successful extensions: 19169
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19151
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)