Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_A04
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC060865-1|AAH60865.1| 599|Homo sapiens zinc finger protein 530... 35 0.34
AC003682-5|AAC24609.1| 557|Homo sapiens R28830_2 protein. 35 0.34
AB040941-1|BAA96032.1| 573|Homo sapiens KIAA1508 protein protein. 35 0.34
U38904-1|AAA93261.1| 367|Homo sapiens zinc finger protein C2H2-... 31 5.5
BC110856-1|AAI10857.1| 576|Homo sapiens ZNF211 protein protein. 31 5.5
BC089440-1|AAH89440.1| 541|Homo sapiens ZNF211 protein protein. 31 5.5
AB209847-1|BAD93084.1| 590|Homo sapiens zinc finger protein 211... 31 5.5
AB209273-1|BAD92510.1| 567|Homo sapiens zinc finger protein 211... 31 5.5
U43431-2|AAB03695.1| 976|Homo sapiens DNA topoisomerase III pro... 31 7.2
U43431-1|AAB03694.1| 1001|Homo sapiens DNA topoisomerase III pro... 31 7.2
DQ117529-1|AAZ20773.1| 670|Homo sapiens zinc finger protein pro... 31 7.2
BT006853-1|AAP35499.1| 474|Homo sapiens zinc finger protein 256... 31 7.2
BC051748-1|AAH51748.1| 1001|Homo sapiens topoisomerase (DNA) III... 31 7.2
BC010996-1|AAH10996.2| 682|Homo sapiens zinc finger protein 16 ... 31 7.2
BC001438-1|AAH01438.2| 627|Homo sapiens zinc finger protein 256... 31 7.2
AL834451-1|CAD39111.1| 688|Homo sapiens hypothetical protein pr... 31 7.2
AF244088-1|AAF75235.1| 671|Homo sapiens zinc finger protein pro... 31 7.2
BX537980-1|CAD97942.1| 591|Homo sapiens hypothetical protein pr... 30 9.6
BC126480-1|AAI26481.1| 660|Homo sapiens zinc finger protein 540... 30 9.6
BC126478-1|AAI26479.1| 660|Homo sapiens zinc finger protein 540... 30 9.6
BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein. 30 9.6
BC017940-1|AAH17940.1| 531|Homo sapiens Unknown (protein for IM... 30 9.6
BC014161-1|AAH14161.1| 402|Homo sapiens zinc finger protein 485... 30 9.6
AL832315-1|CAD38611.1| 660|Homo sapiens hypothetical protein pr... 30 9.6
AL832100-1|CAD91161.1| 628|Homo sapiens hypothetical protein pr... 30 9.6
AL645634-2|CAH73487.1| 402|Homo sapiens zinc finger protein 485... 30 9.6
AK131388-1|BAD18539.1| 637|Homo sapiens protein ( Homo sapiens ... 30 9.6
AK074679-1|BAC11133.1| 441|Homo sapiens protein ( Homo sapiens ... 30 9.6
AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein. 30 9.6
AB074186-1|BAE45743.1| 343|Homo sapiens putative protein produc... 30 9.6
AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein. 30 9.6
>BC060865-1|AAH60865.1| 599|Homo sapiens zinc finger protein 530
protein.
Length = 599
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S F +RR ++KP CS+C +S
Sbjct: 437 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 471
>AC003682-5|AAC24609.1| 557|Homo sapiens R28830_2 protein.
Length = 557
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S F +RR ++KP CS+C +S
Sbjct: 395 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 429
>AB040941-1|BAA96032.1| 573|Homo sapiens KIAA1508 protein protein.
Length = 573
Score = 35.1 bits (77), Expect = 0.34
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S F +RR ++KP CS+C +S
Sbjct: 411 CSECGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 445
>U38904-1|AAA93261.1| 367|Homo sapiens zinc finger protein C2H2-25
protein.
Length = 367
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S S ++RR +P CSQC +S
Sbjct: 314 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 348
>BC110856-1|AAI10857.1| 576|Homo sapiens ZNF211 protein protein.
Length = 576
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S S ++RR +P CSQC +S
Sbjct: 523 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 557
>BC089440-1|AAH89440.1| 541|Homo sapiens ZNF211 protein protein.
Length = 541
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S S ++RR +P CSQC +S
Sbjct: 488 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 522
>AB209847-1|BAD93084.1| 590|Homo sapiens zinc finger protein 211
isoform 2 variant protein.
Length = 590
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S S ++RR +P CSQC +S
Sbjct: 537 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 571
>AB209273-1|BAD92510.1| 567|Homo sapiens zinc finger protein 211
isoform 2 variant protein.
Length = 567
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
CS C K S S ++RR +P CSQC +S
Sbjct: 514 CSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKS 548
>U43431-2|AAB03695.1| 976|Homo sapiens DNA topoisomerase III protein.
Length = 976
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +2
Query: 179 NTAPDNTYSAXSWPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 352
NTAP T A SW G S A+ +RP SS + A KP+ CS CHQ
Sbjct: 914 NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 964
>U43431-1|AAB03694.1| 1001|Homo sapiens DNA topoisomerase III protein.
Length = 1001
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +2
Query: 179 NTAPDNTYSAXSWPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 352
NTAP T A SW G S A+ +RP SS + A KP+ CS CHQ
Sbjct: 939 NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 989
>DQ117529-1|AAZ20773.1| 670|Homo sapiens zinc finger protein
protein.
Length = 670
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
C+ C K R S + +++R + KP VCS+C
Sbjct: 311 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 342
>BT006853-1|AAP35499.1| 474|Homo sapiens zinc finger protein 256
protein.
Length = 474
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
C+ C K+ S S +RR +P CS+C +S
Sbjct: 368 CNECGKFFSQSSSLIRHRRSHTGERPYECSECWKS 402
>BC051748-1|AAH51748.1| 1001|Homo sapiens topoisomerase (DNA) III
alpha protein.
Length = 1001
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = +2
Query: 179 NTAPDNTYSAXSWPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQ 352
NTAP T A SW G S A+ +RP SS + A KP+ CS CHQ
Sbjct: 939 NTAP-GTSGAPSWTGDRGRT----LESEARSKRPRASSSDMGSTA--KKPRKCSLCHQ 989
>BC010996-1|AAH10996.2| 682|Homo sapiens zinc finger protein 16
protein.
Length = 682
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
C+ C K R S + +++R + KP VCS+C
Sbjct: 323 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 354
>BC001438-1|AAH01438.2| 627|Homo sapiens zinc finger protein 256
protein.
Length = 627
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQS 355
C+ C K+ S S +RR +P CS+C +S
Sbjct: 521 CNECGKFFSQSSSLIRHRRSHTGERPYECSECWKS 555
>AL834451-1|CAD39111.1| 688|Homo sapiens hypothetical protein
protein.
Length = 688
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
C+ C K R S + +++R + KP VCS+C
Sbjct: 329 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 360
>AF244088-1|AAF75235.1| 671|Homo sapiens zinc finger protein
protein.
Length = 671
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
C+ C K R S + +++R + KP VCS+C
Sbjct: 312 CNECGKAFRRSSNLIQHQRIHSGEKPYVCSEC 343
>BX537980-1|CAD97942.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 357 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 396
>BC126480-1|AAI26481.1| 660|Homo sapiens zinc finger protein 540
protein.
Length = 660
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 357 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 396
>BC126478-1|AAI26479.1| 660|Homo sapiens zinc finger protein 540
protein.
Length = 660
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 357 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 396
>BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein.
Length = 1486
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 324 NRRYVRSVTNPENNEASIEHSHHTVDIGLDQPIESHRNTRDLRF----LYP-RGKLPVPT 488
+++ V+S T+P A + ++ QP +H+ + L+ LYP R K+PV
Sbjct: 1001 DKKPVKSETSPVAPRAGSQQKAQSLPQPQQQPPPAHKINQGLQVPAVSLYPSRKKVPVKD 1060
Query: 489 LPPF 500
LPPF
Sbjct: 1061 LPPF 1064
>BC017940-1|AAH17940.1| 531|Homo sapiens Unknown (protein for
IMAGE:4278917) protein.
Length = 531
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 357 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 396
>BC014161-1|AAH14161.1| 402|Homo sapiens zinc finger protein 485
protein.
Length = 402
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +2
Query: 215 WPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
W G + C C K + + S ++R KP C +C
Sbjct: 81 WEGRSSTEKNYKCKECGKVFKYNSSFISHQRNHTSEKPHKCKEC 124
>AL832315-1|CAD38611.1| 660|Homo sapiens hypothetical protein
protein.
Length = 660
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 357 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 396
>AL832100-1|CAD91161.1| 628|Homo sapiens hypothetical protein
protein.
Length = 628
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 325 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 364
>AL645634-2|CAH73487.1| 402|Homo sapiens zinc finger protein 485
protein.
Length = 402
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +2
Query: 215 WPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
W G + C C K + + S ++R KP C +C
Sbjct: 81 WEGRSSTEKNYKCKECGKVFKYNSSFISHQRNHTSEKPHKCKEC 124
>AK131388-1|BAD18539.1| 637|Homo sapiens protein ( Homo sapiens
cDNA FLJ16465 fis, clone BRHIP2017553, weakly similar
to Zinc finger protein 184. ).
Length = 637
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 334 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 373
>AK074679-1|BAC11133.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ90198 fis, clone MAMMA1001532, moderately
similar to ZINC FINGER PROTEIN 84. ).
Length = 441
Score = 30.3 bits (65), Expect = 9.6
Identities = 11/44 (25%), Positives = 17/44 (38%)
Frame = +2
Query: 215 WPGTAMAVSRXXCSSCAKYRRPSDSSFENRRRAARSKPKVCSQC 346
W G + C C K + + S ++R KP C +C
Sbjct: 120 WEGRSSTEKNYKCKECGKVFKYNSSFISHQRNHTSEKPHKCKEC 163
>AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein.
Length = 1479
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 324 NRRYVRSVTNPENNEASIEHSHHTVDIGLDQPIESHRNTRDLRF----LYP-RGKLPVPT 488
+++ V+S T+P A + ++ QP +H+ + L+ LYP R K+PV
Sbjct: 993 DKKPVKSETSPVAPRAGSQQKAQSLPQPQQQPPPAHKINQGLQVPAVSLYPSRKKVPVKD 1052
Query: 489 LPPF 500
LPPF
Sbjct: 1053 LPPF 1056
>AB074186-1|BAE45743.1| 343|Homo sapiens putative protein product
of Nbla10512 protein.
Length = 343
Score = 30.3 bits (65), Expect = 9.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 251 CSSCAKYRRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 370
C C K R S E+RR A KP C +C +S RG
Sbjct: 40 CKECGKTFRLSFYLTEHRRTHAGKKPYECKECGKSFNVRG 79
>AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein.
Length = 1508
Score = 30.3 bits (65), Expect = 9.6
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 324 NRRYVRSVTNPENNEASIEHSHHTVDIGLDQPIESHRNTRDLRF----LYP-RGKLPVPT 488
+++ V+S T+P A + ++ QP +H+ + L+ LYP R K+PV
Sbjct: 1022 DKKPVKSETSPVAPRAGSQQKAQSLPQPQQQPPPAHKINQGLQVPAVSLYPSRKKVPVKD 1081
Query: 489 LPPF 500
LPPF
Sbjct: 1082 LPPF 1085
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,897,167
Number of Sequences: 237096
Number of extensions: 2326789
Number of successful extensions: 11661
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11648
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -