Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_A04
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    29   4.4  
AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical ...    28   7.6  

>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 137 SCQXFIQPTFSATANTAPDNTYSAXSWPGTAMAVS 241
           S   F+ PT S TA T P +T  A S   +AMA S
Sbjct: 463 STPSFLSPTDSLTATTPPGSTTQAASTTESAMASS 497


>AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical
           protein F02E11.3 protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 528 GNRYRRHASEDQEELRQYNEH--FLIPRDIFQE 620
           G  YR H   D EEL + +EH  +L   DI+ E
Sbjct: 29  GTTYRSHRHADYEELSELSEHDVYLDDSDIYAE 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,154,172
Number of Sequences: 27780
Number of extensions: 359276
Number of successful extensions: 1164
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)