Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_A02
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112003-1|AAI12004.1| 292|Homo sapiens RWD domain containing 2... 53 1e-06
BC104816-1|AAI04817.1| 292|Homo sapiens RWD domain containing 2... 53 1e-06
BC010930-1|AAH10930.1| 292|Homo sapiens RWD domain containing 2... 53 1e-06
AL049699-2|CAB52345.1| 292|Homo sapiens protein ( Human DNA seq... 53 1e-06
Y19009-1|CAB88085.1| 319|Homo sapiens hypothetical protein prot... 36 0.14
BC017912-1|AAH17912.1| 319|Homo sapiens chromosome 21 open read... 36 0.14
BC012546-1|AAH12546.1| 319|Homo sapiens chromosome 21 open read... 36 0.14
AL163249-2|CAB90431.1| 319|Homo sapiens C21orf6 protein. 36 0.14
AK223357-1|BAD97077.1| 319|Homo sapiens chromosome 21 open read... 36 0.14
AK000056-1|BAA90913.1| 319|Homo sapiens protein ( Homo sapiens ... 36 0.14
AF212232-1|AAK14918.1| 319|Homo sapiens GL011 protein. 36 0.14
>BC112003-1|AAI12004.1| 292|Homo sapiens RWD domain containing 2A
protein.
Length = 292
Score = 53.2 bits (122), Expect = 1e-06
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +2
Query: 221 LXSXXPXKGXXLLCXKNX-KXXKSFIEXXSEXVPDNLXF--TLXLFNXXFKIXISIXLPS 391
L S P +G L N K ++E E +P + F TL + KI + + +P
Sbjct: 19 LFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPH 78
Query: 392 FYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQNXLRX*NYXK 571
YP ++ ++L+R Q+ L+N L ++ T G LC I W+Q+ N
Sbjct: 79 SYPYVALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQD-----NSAS 133
Query: 572 YFLXXXLI 595
YFL L+
Sbjct: 134 YFLNRKLV 141
>BC104816-1|AAI04817.1| 292|Homo sapiens RWD domain containing 2A
protein.
Length = 292
Score = 53.2 bits (122), Expect = 1e-06
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +2
Query: 221 LXSXXPXKGXXLLCXKNX-KXXKSFIEXXSEXVPDNLXF--TLXLFNXXFKIXISIXLPS 391
L S P +G L N K ++E E +P + F TL + KI + + +P
Sbjct: 19 LFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPH 78
Query: 392 FYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQNXLRX*NYXK 571
YP ++ ++L+R Q+ L+N L ++ T G LC I W+Q+ N
Sbjct: 79 SYPYVALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQD-----NSAS 133
Query: 572 YFLXXXLI 595
YFL L+
Sbjct: 134 YFLNRKLV 141
>BC010930-1|AAH10930.1| 292|Homo sapiens RWD domain containing 2
protein.
Length = 292
Score = 53.2 bits (122), Expect = 1e-06
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +2
Query: 221 LXSXXPXKGXXLLCXKNX-KXXKSFIEXXSEXVPDNLXF--TLXLFNXXFKIXISIXLPS 391
L S P +G L N K ++E E +P + F TL + KI + + +P
Sbjct: 19 LFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPH 78
Query: 392 FYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQNXLRX*NYXK 571
YP ++ ++L+R Q+ L+N L ++ T G LC I W+Q+ N
Sbjct: 79 SYPYLALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQD-----NSAS 133
Query: 572 YFLXXXLI 595
YFL L+
Sbjct: 134 YFLNRKLV 141
>AL049699-2|CAB52345.1| 292|Homo sapiens protein ( Human DNA
sequence from clone RP4-747H23 on chromosome 6q13-15
Contains the 3' end of the ME1 gene for malic enzyme 1
(NADP(+)-dependent, cytomalic enzyme 1,
NADP(+)-dependent, cytosolic).
Length = 292
Score = 53.2 bits (122), Expect = 1e-06
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +2
Query: 221 LXSXXPXKGXXLLCXKNX-KXXKSFIEXXSEXVPDNLXF--TLXLFNXXFKIXISIXLPS 391
L S P +G L N K ++E E +P + F TL + KI + + +P
Sbjct: 19 LFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIEEPKVKIDLQVTMPH 78
Query: 392 FYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQNXLRX*NYXK 571
YP ++ ++L+R Q+ L+N L ++ T G LC I W+Q+ N
Sbjct: 79 SYPYVALQLFGRSSELDRHQQLLLNKGLTSYIGTFDPGELCVCAAIQWLQD-----NSAS 133
Query: 572 YFLXXXLI 595
YFL L+
Sbjct: 134 YFLNRKLV 141
>Y19009-1|CAB88085.1| 319|Homo sapiens hypothetical protein
protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>BC017912-1|AAH17912.1| 319|Homo sapiens chromosome 21 open reading
frame 6 protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>BC012546-1|AAH12546.1| 319|Homo sapiens chromosome 21 open reading
frame 6 protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>AL163249-2|CAB90431.1| 319|Homo sapiens C21orf6 protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>AK223357-1|BAD97077.1| 319|Homo sapiens chromosome 21 open reading
frame 6 variant protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>AK000056-1|BAA90913.1| 319|Homo sapiens protein ( Homo sapiens
cDNA FLJ20049 fis, clone COL00683. ).
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
>AF212232-1|AAK14918.1| 319|Homo sapiens GL011 protein.
Length = 319
Score = 36.3 bits (80), Expect = 0.14
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 371 ISIXLPSFYPEXXPDVYIXCNQLNRMQETLINSQLQEFMXTIXXGXLCXYTIITWIQ 541
++ LP YP P++ + L+R Q+T +N+ L F+ G +C W++
Sbjct: 103 LACILPFKYPAVLPEITVRSVLLSRSQQTQLNTDLTAFLQKHCHGDVCILNATEWVR 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,007,829
Number of Sequences: 237096
Number of extensions: 306987
Number of successful extensions: 136
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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